| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_3094 |
|---|
| Symbol | |
|---|
| ID | 9169613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | - |
|---|
| Start bp | 3628690 |
|---|
| End bp | 3630486 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | phosphoenolpyruvate carboxykinase |
|---|
| Protein accession | YP_003653682 |
|---|
| Protein GI | 296271050 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.426752 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGTGC CAGTGGAGAC TTCTGCGCCC ACCACCCACA CCGGCCTCGT CGAGTGGGTC
AAGGAGATCG CCGAGCTCAC CCAACCCGAC CGGATCCATT GGTGTGACGG CTCCGAAGCG
GAGTGGACGC GGCTGACCAA CCTGCTCGTG GAGCAGGGCA CCTTCAAACG CCTCGCCAAG
CGGCCGAACA GCTTCTACGC CGCCTCGGAT CCGAGCGACG TCGCACGCGT GGAGAGCCGC
ACCTTCATCT GCTCCGAGCG GCAGGAGGAC GCCGGCCCCA CCAACAACTG GATCGCGCCC
GACGAGATGC GCCGCACCTT CGCCACCCTC TTCAAGGGCT GCATGCGCGG GCGGACCATG
TACGTGATCC CCTTCTGCAT GGGCCCGCTC GGCGGGAACA TCTCCCAGCT CGGCGTCCAG
CTCACCGACT CCGCGTACGT CGCGGTGTCG ATGCGGATCA TGACGCGGAT GGGCGAGCGG
GCGCTGCGCC TCATCGAGGA GCGGGGCGAC TTCGTCAAGT GCGTCCACTC GGTCGGCATG
CCGCTCGAGC CCGGCCAGGC CGACGTGCCG TGGCCGTGCA ACGAGACCAA GTACATCAGC
CACTTCCCGG AGACCAGGGA GATCTGGTCG TTCGGCTCGG GCTACGGCGG CAACGCGCTG
CTCGGCAAGA AGTGCTACGC CCTGCGGATC GCGAGCGTGA TGGCGCGCGA CGAGGGCTGG
CTCGCCGAGC ACATGCTCAT CCTCAAGATC ACGCCGCCGG AGGGCGAGCC GCGGTACATC
GCGGCGGCCT TCCCCTCCGC CTGCGGCAAG ACCAACCTCG CGATGCTCCA GCCGACCATC
CCCGGCTGGA AGGTGGAGAC GATCGGCGAC GACATCGCCT GGATGCGGTT CGGCCCGGAC
GGCCGGCTGT ACGCGATCAA CCCGGAGGCC GGCTTCTTCG GGGTGGCGCC GGGCACCGGC
ATGTCGACCA ACGCCAACGC GATCAAGACG CTCTGGGGGA ACTGCATCTT CACCAACGTC
GCGCTCACCG ACGACGGCGA CGTCTGGTGG GAGGGCCTGA CCGATGAGCC GCCCGCGCAC
CTGATCGACT GGCGGGGCCG GGACTGGACG CCGGACAGCC CCGAGCCGGC CGCCCACCCG
AACGCGCGGT TCACCGTGCC GGCCTCGCAG TGCCCGACGA TCGCGCCGGA GTGGGAGGAC
CCGAACGGCG TGCCGATCTC GGCCATCCTG TTCGGCGGCC GCCGGGCGAC CACGGTGCCG
CTCGTCACCG AGGCGTTCAG CTGGCAGCAC GGCGTGTTCC TCGGCGCCAA CGTGGCCTCG
GAGAAGACCG CGGCCGCCGA GGGCAAGGTC GGTGAGCTCC GCCGGGACCC GTTCGCGATG
CTGCCGTTCT GCGGCTACAA CATGGGCGAC TACTTCGCCC ACTGGCTCAA GATCGGCAAG
ATGACCGATC CGGAGAAGCT GCCGCGGATC TACTACGTGA ACTGGTTCCG CAAGGACGCC
GACGGCAAGT TCCTCTGGCC GGGTTACGGC GAGAACAGCC GGGTGCTCAA GTGGATCGTC
GAGCGGCTGA ACGGCACGGC CGAGGCGGTG GCCACCCCGA TCGGCAACCT GCCCAAGACG
ATCGACACCG AGGGGCTCGA CCTGCCCGAG GAGCGGCTGA AGGCCCTGCT CACCGTGGAC
GTCGACGAGT GGCGCCGGGA GGCGGAGCTG ATCCCGCCGT TCCTCGAGAC CTTCGGCGAC
CACACGCCGT CCGAGCTCTG GGACGAGTAC CACGCCCTGG TGAAGCGTCT CGGCTGA
|
|---|
| Protein sequence | MSVPVETSAP TTHTGLVEWV KEIAELTQPD RIHWCDGSEA EWTRLTNLLV EQGTFKRLAK
RPNSFYAASD PSDVARVESR TFICSERQED AGPTNNWIAP DEMRRTFATL FKGCMRGRTM
YVIPFCMGPL GGNISQLGVQ LTDSAYVAVS MRIMTRMGER ALRLIEERGD FVKCVHSVGM
PLEPGQADVP WPCNETKYIS HFPETREIWS FGSGYGGNAL LGKKCYALRI ASVMARDEGW
LAEHMLILKI TPPEGEPRYI AAAFPSACGK TNLAMLQPTI PGWKVETIGD DIAWMRFGPD
GRLYAINPEA GFFGVAPGTG MSTNANAIKT LWGNCIFTNV ALTDDGDVWW EGLTDEPPAH
LIDWRGRDWT PDSPEPAAHP NARFTVPASQ CPTIAPEWED PNGVPISAIL FGGRRATTVP
LVTEAFSWQH GVFLGANVAS EKTAAAEGKV GELRRDPFAM LPFCGYNMGD YFAHWLKIGK
MTDPEKLPRI YYVNWFRKDA DGKFLWPGYG ENSRVLKWIV ERLNGTAEAV ATPIGNLPKT
IDTEGLDLPE ERLKALLTVD VDEWRREAEL IPPFLETFGD HTPSELWDEY HALVKRLG
|
|---|
| |