| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_3085 |
|---|
| Symbol | |
|---|
| ID | 9169604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | + |
|---|
| Start bp | 3617088 |
|---|
| End bp | 3618482 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | fumarate lyase |
|---|
| Protein accession | YP_003653673 |
|---|
| Protein GI | 296271041 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.743068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGT ATCGCGTCGA GCACGACTCC ATGGGCGAGG TACGGGTACC GGCGCGTGCC
AAGTGGCGGG CGCAGACCCA GCGGGCGGTG GAGAACTTCC CGGTATCCGG CCAGGGCCTG
GAGCCGGCGC ACATCGCCGC CCTTGCCCGG ATCAAGGCCG CCTGCGCGAA GGTGAACGCC
GCGTACGGCG TGATCCCCCG CGACATGGCC GAGGCGATCC AGGAGGCCGC GCAGGAGGTG
ATCGAGGGAC GCTGGAACGA CCAGTTCCCC GTCGACGTCT TCCAGACCGG GTCGGGCACC
TCGTCCAACA TGAACGTCAA CGAGGTGATC GCCACCCTCG CCGAGGAGCG GCTGGGCCGT
CCGGTGCACC CGAACGACCA CGTCAACGCC TCCCAGTCGT CCAACGACGT GTTCCCGTCC
TCGATCCACA TCGCGGCGAC GGAGATGGTG GTGCACGGGC TCACCCCAGC CCTGGAGCAC
CTCGCCACCG AGCTCGAGGA GAAGGCGGCC GAGTTCGCCG ACGTGGTGAA GGCCGGCCGT
ACCCACCTGA TGGACGCCAC GCCGGTCACG CTCGGCCAGG AGTTCGGCGG CTACGCCACC
CAGATCGAGC TGGGGATCGA GCGGCTGCAG GCGGTGCTGC CGCGCGTCGC CGAGCTCCCG
CTGGGCGGCA CCGCGGTGGG CACCGGGGTG AACGTGCCGG GCCCGCGCTG GGCGGCCGAC
GTGATCGAGG AGCTGAGCCG GATGACCGGC CTGCCGTTCA CCGAGGCGCG GGACCACTTC
GAGGCGCAGG GCGCGCGGGA CGCCCTGGTC GAGCTCTCCG GCGTGCTCAA GGTGATCGCG
GTATCGCTCA ACAAGATCGC GAATGACCTG CGCTGGATGG GGTCGGGGCC GCGCACCGGG
CTCGCCGAGA TCAACCTGCC CGACCTGCAG CCCGGTTCGT CGATCATGCC GGCGAAGGTC
AACCCGGTCG TCCCCGAGGC GGTCACCATG GTCGCCGCGC AGGTCATCGG GAACGACACC
ACGGTCACCC TCGCCGGGGC CTCCGGCGCG TTCGAGCTCA ACGTGATGCT CCCGGTGATC
GCCCGGAACG TCCTGGAGTC GATCCGGCTG CTCACCAACG TCTCCCGGCT GCTCGCCGAC
CGGTGCGTCA GCGGGATCAC CGCGAACGTG GCGCGGCTGC GGGAGTACGC CGAGTCCTCC
CCGTCGATCG TCACCCCGCT CAACCGGTAC GTCGGGTACG AGGAGGCGGC CCGGATCGCC
AAGCAGGCGC TCCAGGAGGG CAAGACGATC AAGCAGGTGG TGATCGAGCG CGGTCACGTG
GCGGCCGGCC GGATCACCGA GGAGGAGCTC GACCGGGTCC TCGACGTGCT CGCCATGACC
CGCCGCCCCA CCTGA
|
|---|
| Protein sequence | MDEYRVEHDS MGEVRVPARA KWRAQTQRAV ENFPVSGQGL EPAHIAALAR IKAACAKVNA
AYGVIPRDMA EAIQEAAQEV IEGRWNDQFP VDVFQTGSGT SSNMNVNEVI ATLAEERLGR
PVHPNDHVNA SQSSNDVFPS SIHIAATEMV VHGLTPALEH LATELEEKAA EFADVVKAGR
THLMDATPVT LGQEFGGYAT QIELGIERLQ AVLPRVAELP LGGTAVGTGV NVPGPRWAAD
VIEELSRMTG LPFTEARDHF EAQGARDALV ELSGVLKVIA VSLNKIANDL RWMGSGPRTG
LAEINLPDLQ PGSSIMPAKV NPVVPEAVTM VAAQVIGNDT TVTLAGASGA FELNVMLPVI
ARNVLESIRL LTNVSRLLAD RCVSGITANV ARLREYAESS PSIVTPLNRY VGYEEAARIA
KQALQEGKTI KQVVIERGHV AAGRITEEEL DRVLDVLAMT RRPT
|
|---|
| |