Gene Tbis_2955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_2955 
Symbol 
ID9169474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp3470198 
End bp3471286 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content74% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003653546 
Protein GI296270914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0997728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.116407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAAGTG AGGACCTCGT GCCGACCTCG AAACGCCAGC GTCCACCCGT CATCGCCGTC 
ACCGGCGCCG CCACCGGCGT CGGCCGGGCG TTCCTGGCGA GAGTGGCCTC GTCTGCGGAT
TTCCGGCGCG TCGTGGCCAT CGACGACCAG CGCGGCGACG TAGCGAACGT GACGTGGCGG
GTCCTCGACA TCCGCGATCC GCTGTTGGCG AACCGGATCT CCGACGTCGA CGTGCTGGTC
CACCTCGGCA TGGATCAGTC GCTCGACTCC GACCCCGTGG AGCGCCGCAG GTACAACCTC
CGGGCGGCGC AGACCACGCT GACCGCGTGC GCGGCGGCGC GGGTCCGCCG GGTCGTGCTG
GTGACCAGCG CGATGGTGTA CGGCGCGGCC CCCGACAACC CGGTGCCGCT CCCGGAGGAC
GCGCCCGTCT CGGCCGAGAC CGGCACCGGC CTGGTGGGGG ACTTCCTGGA GATCGAGGCG
CTGGCGCGGC GCTCGCTCCG CTCGCACCCG GGCCTGGAGG TGACCGTGCT GCGGCCGGCC
GCCTTGGTGG GCCCGGGGGT GGACACCGTG GTGACCCGCC ACTTCGAGGC GCCCCGGCTG
CTCGTGGTGA AGGGCTGCCT GCCGCGCTGG CAGTTCTGCC ACGTCGACGA CCTGGTCTCC
GCGCTCGAGC TGGCCGCGCT CGGCAAGGTC TCCGGGGTCG TGGCCGTGGG CTGCGACGGC
TGGCTGGAGA TGGACCAGGT GGAGGAGATC TCCGGGCTGC GCCGCCTCGA GCTGCCGGCC
GGGCTCACCT TCGGCACGGC GCAGCGGCTC CACCGGCTCG GCATCACCCC CACCCCGGCC
GTGGACCTGC AGTACGTGGT CTACCCGTGG GTCGTCGACT GCGCCTCGCT CCGGGCCGTG
GGGTGGAAGC CGTCGTGGAC CAACGAGGCC GCCCTGCGCG AGCTGCTCGC GCTCTCCGAG
GGCCGGCACG CCGTGGTCGG CCGCCGGCTC TCCGGCAAGG AGGCGACCAT CACCGCGGCG
GGCGCCACGG CCGCGATCAT CGGCACGGCG GCGATCGTCC ACGTCGCGCG GCGGAAGCGG
CGTCCGTGA
 
Protein sequence
MQSEDLVPTS KRQRPPVIAV TGAATGVGRA FLARVASSAD FRRVVAIDDQ RGDVANVTWR 
VLDIRDPLLA NRISDVDVLV HLGMDQSLDS DPVERRRYNL RAAQTTLTAC AAARVRRVVL
VTSAMVYGAA PDNPVPLPED APVSAETGTG LVGDFLEIEA LARRSLRSHP GLEVTVLRPA
ALVGPGVDTV VTRHFEAPRL LVVKGCLPRW QFCHVDDLVS ALELAALGKV SGVVAVGCDG
WLEMDQVEEI SGLRRLELPA GLTFGTAQRL HRLGITPTPA VDLQYVVYPW VVDCASLRAV
GWKPSWTNEA ALRELLALSE GRHAVVGRRL SGKEATITAA GATAAIIGTA AIVHVARRKR
RP