Gene Tbis_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_2948 
Symbol 
ID9169465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp3459340 
End bp3460965 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content67% 
IMG OID 
Productextracellular solute-binding protein family 5 
Protein accessionYP_003653539 
Protein GI296270907 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.649638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.755867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGGC ACAAGCGTCT CCTAGCGGCG GGAGCCGTGG TGGCGATGGC GTTGACCGCC 
ACCGCGTGCG CCGGTGGACA GGTCCGGGGC TCCCAATCCC CGGCGGCGTC CGGCGCCCCG
ACCGACGCCA CGTTCGTCTA CGTCCCGAAC CTCGAGGTAG TGACCGAATG GGACCCGGCG
AGCTCGTACT CCAACGAGAT CATCGCCATG CACAACATCT ACGAGACGCT GACGCGGTAC
AACCCGCAGA CCAAGAAGGC GGAGCCGCTG CTGGCGACCT CGTGGACCTC CTCCGATGAG
GGCAAGAAGT GGACCTTCAC CCTGCGCCAG GGGGTGACCT TCCACACCGG CAAGCCGCTC
GACGCCAAGG CGGCGAAGGC CGCGATCGAG CGCACCAAGA AGATCGGTGA CGGCGCGGCC
TACATCTGGG ACGCGGTCGA CAAGATCGAG GCGAAGGACG ACTTCACCCT CGAGTTCAAG
CTCAAGTACC CGGTGCCGCT CGACCTGGTC GCCTCGTCCG GCTACGCGGC CTTCATCTAC
GACACCACGG CGGTCGACGG TGACTCCGAC GACCTCAAGA AGTGGTTCAA CGAGGGCAAC
GACGCCGGCA CGGGCCCGTA CACGGTCGAG AGCTGGCGCA AGGGCGAAGA GGTCGAGCTG
ACCCTGAAGG CCTACGACCA GTACTGGGGC GGCTGGGACG GCCCGCACTA CAAGAAGGTC
TCCTACCGGG TGACGCCCGA GATCACCACC GCCTGGCAGC TCCTCCAGCG CGGTGAGGTC
TCGTTCGTGC CGCGCCTCAA CCCGCAGCTC TTCGCCCAGG CGGGCTCCGC GGAGAACGTC
CAGACCTCGC AGACCCCGTC CTTCCAGAAC CTGCTCCTGC TGTTCAACAC CGCCAGCGGC
CCGCTCAAGG ACGTCCGGCT GCGCAAGGCG ATCCAGAAGG CGATCGACTA CGACGGCCTG
CTCGCCGCGC TCCAGGGCTC CGGCGTCGCC GCCAGCGGCT TCGTCCCCGA GGGCCTGCTC
GGCCACGTCC CCGGCCGCAC GCCCAAGCAG GACCTCGCCG GTGCCGAGGC GCTGCTGAAG
GAGGCCGGTT ACGGGCCGGG CGGCAAGCAG CTCGAGCTCG AGCTCACCTA CGCGCAGGGC
GACAACGACC AGCAGGTCCT GGTCACCCTG CTCTCCTCCA CGCTCGACAA GCTCAACGTG
AAGCTGTCGG CCAAGGCCCT GCAGTGGAAC ACCCAGTGGG ACCAGGGCAA GGCGAAGGAC
CCGGAGAAGC GCCAGGACAT CTTCGTCATG TACTGGTGGC CGGACTACGC CGACGCCTAC
TCGTGGTTCT TCAACGTGTT CCGCAGCACG CCCGACGACC AGATCTCCTT CAACCTCTCC
TACCTGAAGG ACAAGAAGGT CGACGAGGCG ATCGACGGGT TGCCCGAGCT CATGGCGACC
GACCCGGCGG CGGCGGAGAA GGCCGCGGCC GAGCTGCAGG CGAAGATCAT CGACGAGCAC
GCCGCGGTGG CCGTGCCGTA CGTGGTCAAC TACCAGCGGG CCTACGCCAA GTCGGTCCAG
GGGTACGTGG ACAACCCGGC CTACCCGAAC GTGGTGTTCG TCTACGACCT CAAGCCCGCA
GCCTGA
 
Protein sequence
MRWHKRLLAA GAVVAMALTA TACAGGQVRG SQSPAASGAP TDATFVYVPN LEVVTEWDPA 
SSYSNEIIAM HNIYETLTRY NPQTKKAEPL LATSWTSSDE GKKWTFTLRQ GVTFHTGKPL
DAKAAKAAIE RTKKIGDGAA YIWDAVDKIE AKDDFTLEFK LKYPVPLDLV ASSGYAAFIY
DTTAVDGDSD DLKKWFNEGN DAGTGPYTVE SWRKGEEVEL TLKAYDQYWG GWDGPHYKKV
SYRVTPEITT AWQLLQRGEV SFVPRLNPQL FAQAGSAENV QTSQTPSFQN LLLLFNTASG
PLKDVRLRKA IQKAIDYDGL LAALQGSGVA ASGFVPEGLL GHVPGRTPKQ DLAGAEALLK
EAGYGPGGKQ LELELTYAQG DNDQQVLVTL LSSTLDKLNV KLSAKALQWN TQWDQGKAKD
PEKRQDIFVM YWWPDYADAY SWFFNVFRST PDDQISFNLS YLKDKKVDEA IDGLPELMAT
DPAAAEKAAA ELQAKIIDEH AAVAVPYVVN YQRAYAKSVQ GYVDNPAYPN VVFVYDLKPA
A