| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_2838 |
|---|
| Symbol | |
|---|
| ID | 9169354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | + |
|---|
| Start bp | 3324335 |
|---|
| End bp | 3326140 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_003653430 |
|---|
| Protein GI | 296270798 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.469664 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGGA CGGGTGGCAC CCCGAGCGCG GCCTTGGCCG AGGACCCGCC GGAGGAGGCG
GTCGGCCCGC TCATCCGCGG GCTGGCCGTG ATCCGGCACC TCACCCTCAC CGGTGGCCGC
CGGGTGGTGA GCGAGCTGGT CCGGGAGACC GGGCTCGCCC GCTCCACGGT CGACCGGATC
CTCGGCACGC TCGCCCGGCT CGGCTACGCG CGGCTCGGCG AGCGGGAGGT GGCGCTCGCG
CCCCCGCTGA TGGAGCTGGG GAACGCCTAC CTCGCGGCGT CCCGGATCCC CGCCCTGCTC
GGCCCGATCG CCGACCGGCT CGCCGAGGAG CTCGACGAAT CGGTCTCGAT CGCCGTGCCG
GACCGGGACG GCGTGCGGTT CGTGCACCAG ATGCCGCGCC GGCGCACGAT GTCGGTCACG
TTCCACGTGG GCGACCTGCT GCCCGCGGAG AGCGCCGCGC CGGGGGCGCT GTTCGCCGCC
CACTGGTCCC CGGCCGACTG GGAGCGCTGG CGCGCCCGGG TGGCCGAGGA CCCGGGGTAC
GCCTCCTTCC CGGTGCTGCC CGACGGCACG GCGCGGGGCG CCGGCACCTT CGCCGCCCGG
GCCGAGCGGG CACGGGCGGA CGGCTGGTCG GTGGACGATC AGCAGATCGA GCCCGGGCTG
ATCGCGGTCG CGGTCCCGGT GCGCGATCCG GACGGGCGAC CGCTCTGCGC CCTGAGCGTG
GTGAGCCACA CCAGCCGGCA CACCGCCGGG TCGCTGCGCG ACGCCGTGCT CGGCCGGATG
CGGGAGACGG CCGCCGCCAT GGAGCGCGCG CTCGCCTCAC CCTCCGGCGC GCCCGGTGGC
GCCACCCCGG CGGGGGTGGA CGAGGCGGGC GGCCCGGCCG CCGGCGCGCC ATCGGCGACG
CCGTCCGGTG CGTCAGCGGA GACGCCGGCC GACGCGCCAG CGGACCCGGC GACCGGAGCG
TCTGCGGAGA CGGCGGCCGG CGCGGCGGGG CAGCGGGAGC CCGGTGCCGA GGATCGGGCC
ACCGGCCCCG AGTACATCGA GTCCTTCGCC CGCGGGCTGC GGGTGCTCAC CGCCTTCGGC
GCGCGGACCG AGGCGGTCTC GCTCACCGAG CTCGCCGAGC TCACCGGGCT GCCCCGGGCC
ACGGTGCGCC GCGCGCTGAT CACCCTGACC CACCTCGGAT ACGTGGCCGC GGAGGGGAGG
CTCTTCCGGC TCACCCCGCG GGTGCTCGAC CTCGGCTTCC CCTGCCTCGC CCGGCTCACC
CTGTCGCGGA TCGCCCTCCC CCACCTGGCC TGGCTCAGCG CGCAGGTGAA CGACTCGGCG
TCGATGGCCG TGCTCGCCGG AGACGAGATC CAGTACGTGG CGCGCGTGCC CACGGTGCGG
ATCATGAGCG TCGACATCAC CGTGGGCACC CGGTTCCCGG CGTACGCGAC GTCGATGGGG
CGGGTCCTCC TCGCCGGGCT GCCGCGGGAG GAGCGCGACG CGATCCTCGC CCGCACCGAC
CTGCGGCCGT TCACCCGCCG GACGATCACC GGCCGGGCGC GGCTCGCCGC CGTGCTCGAC
CGGACGGCGC GGGACGGCTA CGCACTGGTC GACCAGGAGC TGGAGGACGG GCTGCGCTCG
ATCGCGGTTC CGGTGCGCGA CCGGGCCGGG AGGGTGGTCG CCGCCGTCAA CGTCTCCAGC
CATGCCGCGC GCCGGACCGC CGAGCAGGCC CGGGAGGCGG TGCTCCCCCT GCTCAGGCGG
GCGGCGGCCC GGATCGAGCA CGACTACCAC ATCGCCACCC GGTTCGCCCG CATCCCGGTG
GCGTGA
|
|---|
| Protein sequence | MDGTGGTPSA ALAEDPPEEA VGPLIRGLAV IRHLTLTGGR RVVSELVRET GLARSTVDRI
LGTLARLGYA RLGEREVALA PPLMELGNAY LAASRIPALL GPIADRLAEE LDESVSIAVP
DRDGVRFVHQ MPRRRTMSVT FHVGDLLPAE SAAPGALFAA HWSPADWERW RARVAEDPGY
ASFPVLPDGT ARGAGTFAAR AERARADGWS VDDQQIEPGL IAVAVPVRDP DGRPLCALSV
VSHTSRHTAG SLRDAVLGRM RETAAAMERA LASPSGAPGG ATPAGVDEAG GPAAGAPSAT
PSGASAETPA DAPADPATGA SAETAAGAAG QREPGAEDRA TGPEYIESFA RGLRVLTAFG
ARTEAVSLTE LAELTGLPRA TVRRALITLT HLGYVAAEGR LFRLTPRVLD LGFPCLARLT
LSRIALPHLA WLSAQVNDSA SMAVLAGDEI QYVARVPTVR IMSVDITVGT RFPAYATSMG
RVLLAGLPRE ERDAILARTD LRPFTRRTIT GRARLAAVLD RTARDGYALV DQELEDGLRS
IAVPVRDRAG RVVAAVNVSS HAARRTAEQA REAVLPLLRR AAARIEHDYH IATRFARIPV
A
|
|---|
| |