Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbis_2516 |
Symbol | |
ID | 9169025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobispora bispora DSM 43833 |
Kingdom | Bacteria |
Replicon accession | NC_014165 |
Strand | - |
Start bp | 2948170 |
End bp | 2950122 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transcriptional regulator CdaR |
Protein accession | YP_003653111 |
Protein GI | 296270479 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.664559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGTTC CTGCGCCCAT TGTGGCCGTA CCGTGGCAGG GAGAGACCGA GCCGTGTGGG GAAGGGCAGC GGGACGCCGC CTGGCGGCCC CGGCCCGCCC ACTGGAACGA GGTGCTGGAG GTCTTCAAGG AGGTCGCGGT CCATGCGACC ACTTCGGCCG ACCTGAACGA GATCCTCACC GTGATCGGCA GCCGGTTGTG CCACCTCCTC GGGGTCAAAC GGTGCTCGGT CTACCTGCGC CGGGACGACG GGAAGTTCCA GGGCGCCGCG GGGTGGAGCG CCACCGAGGG GGACATCGGC GACAAGATCC GCATCCTGGT CTCCGGCATC GAGGGAGACC GGTTCACCCA GGACATCGTC GAATCACGGT CCGCGGTGCT CGTGGTCAAC GCCCAGCAGG ACCCCCGGAC CATCCACAAG ACCATGGTGC GCTGGCGGGT CCGGGACATG CTCGGCGTCC CGCTGGTCGT CGCCGGCGAG GTCATCGGCA TCATCTACGT CGACAACGAG CAGGACCCGC ACGTCTACGA CCCCGTCCAG ATCGAGGTGG CCGAGCTCTT CGGCAGCCTG GCCGCGCTGG TCGTGCAGCA GGCCGTGCTG CACAACAGGC TCCGGGCCCA GGCCATCCAG CTCACCCGGC AGAAGCGCAC GCTGGAGCAC CTCACCAACG TCCACGAGCA GCTCGTCCGC GCCGTGCTCG AGGGCGCGGA CCTCAACCGG GCGGTGCAGA TGCTCAGCGG GCTGCTCAAC CGGCCTGTGG TCCTCTACAA CCCCCGGTTC GACGTCATGG CCTGGGCCGC GCCACCGGGC ATGGCCATGC AGAGCGCGCC GGTCATCCCC GAGCGGGTCC TGAAGATGCC GTCCGTCGCC GCGGTCATCA ACGAGCTCAA CGCGGACCGC CCGTCCGCGA TCATCCCGCC CACGCTCGCC GTCGGCCTCG GCAGCCGGCA CCTGCTCTGC GTCCTGATGA CCGAGGGCCG CCCGGCCGGC TACCTCGGCG TGGTGGAGAT CGGGCGCGCC ATCACCGACC TGGACACCAA GATCGCCGAG CAGGGGGCGG TCGTGATGGC CCTGCAGGTC CTCTCCGAGC GCCGCCAGAT CGAGGCGGAG GGCCAGGCCC GGGAGGACTT CCTCAGCGAC CTGCTCCGCG GCACCCGCGA CGAGGAGCAG CTCATGCGCC GGGCGCCGCA GTTCGGGATC GACCTGCGCA GCCCGTACGT CCTGGTCAGG TTCTGCTACG CGGACGGCCA GCCCGCCACG CCCCGGACCG CCCGGCGCGC CGTCCTCGCC CGGGCCCTGG GGCGCGGCCT CGGCATGCCG GAGCCTCCGG TGATCGGGGT CCCCGGCTCG GACATCGCCC TGGTCCGGCT CACCGGTGGC TCCGAGCCGG CCGCGCTGCG GCGCGTGCGC CGGCGCCTCG AGGCGCTGCT GCGCGAGCTC AGCGCCAAGT TCAAGATCGA GAAGGTCCTG GTCTCCAGTG TGTGCCGCCG GGTCGGCGAC TTCCCGCTCG CGCACCGCGA GATCCGGGAG CTGGAGGAGC TCACCACGGC CTTCAACTGG TCCAGGGGGC TGCTCTTCGC CGACGACCTC GGCCTGTTCC GCCTGATCGT GAACAGCAAC CGGCTCAAGG AGGCGGTGCG CTTCGCCACC GACTTCGTCC GCCCGCTGGC CCGGTACGAC GAGAGCACCG GCGGGCAGCT CGTCGAGACC CTCCGCGCCT ACGTGCAGGC CGAAGGCCAG GTGCGGGGCG CCGCGGAGCT GCTGGGCGTG CACGAGAACA CCATCCGCTA CCGCCTGGCG AAGATGCGCG AGATGGGGTC GCTCGACCCG CACCGGATGG ACATGCTCCT CACCGCCCGC CTGGCGTTCC AGATCCTCGA CTTCGCCTCG GGCGGGCCGC TGGGCCAGGC GTCGGGGCCG GCCGTACCCG CCGCCGGGTC CCAGGTTGTG TGA
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Protein sequence | MHVPAPIVAV PWQGETEPCG EGQRDAAWRP RPAHWNEVLE VFKEVAVHAT TSADLNEILT VIGSRLCHLL GVKRCSVYLR RDDGKFQGAA GWSATEGDIG DKIRILVSGI EGDRFTQDIV ESRSAVLVVN AQQDPRTIHK TMVRWRVRDM LGVPLVVAGE VIGIIYVDNE QDPHVYDPVQ IEVAELFGSL AALVVQQAVL HNRLRAQAIQ LTRQKRTLEH LTNVHEQLVR AVLEGADLNR AVQMLSGLLN RPVVLYNPRF DVMAWAAPPG MAMQSAPVIP ERVLKMPSVA AVINELNADR PSAIIPPTLA VGLGSRHLLC VLMTEGRPAG YLGVVEIGRA ITDLDTKIAE QGAVVMALQV LSERRQIEAE GQAREDFLSD LLRGTRDEEQ LMRRAPQFGI DLRSPYVLVR FCYADGQPAT PRTARRAVLA RALGRGLGMP EPPVIGVPGS DIALVRLTGG SEPAALRRVR RRLEALLREL SAKFKIEKVL VSSVCRRVGD FPLAHREIRE LEELTTAFNW SRGLLFADDL GLFRLIVNSN RLKEAVRFAT DFVRPLARYD ESTGGQLVET LRAYVQAEGQ VRGAAELLGV HENTIRYRLA KMREMGSLDP HRMDMLLTAR LAFQILDFAS GGPLGQASGP AVPAAGSQVV
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