Gene Tbis_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_2398 
Symbol 
ID9168902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp2793231 
End bp2794898 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content67% 
IMG OID 
ProductRpoD subfamily RNA polymerase sigma-70 
Protein accessionYP_003652995 
Protein GI296270363 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.107802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCAGC AGCTTCTCGA GCGTGGGCGC GCGCAGGGAT TCCTCGAGTC CGAGGATGTC 
CGTAAGGCCT TCGAGGAGGC GGACATCCCG ATGTCGCGTG CCGCTGGAGT CCTGCGCAGC
CTCAGCAAGG AGGGTGTGAC CGTCGTGGTG ACGGCCGCGG ATGCGGCGGC GCCGAAGCGC
AAGCGCCGTT CGACCTCGTC CGCGAAGAAG ACCACGAAGT CCGCCGCGGC CAAGGATCCA
CAGCCTGAGA CGGTCACTGC CGTGGTGACC GACTCCACCT CGACCAAGTC GACGTCGAAG
AAGTCCTCGA GCAAGTCGAC GTCGAGCAAG TCCACCTCGG CGAAGTCGGC TTCGGCCAAG
TCCACGACGG CCAAGTCGAC GACGACGAAG TCGAGGTCCA AGTCGACGAA GGCGGCGGCC
GAGAAGCCGG CCGCGGCGAA GAGCAAGGCC GAGGGCACCA CGGCGACCAC GTCCAGGGCC
TCCAAGGCGA AGGCCGAGAC CAAGGCGGCC AAGCCCGTCG ACCTGGTCGA CATCGACGAC
GATCTCGATC TCGATGCCGA TGTCGACATC GACGACTTCG ACCTCGACGT CGATGTCGAT
CTCGACAGCG ACCTCGAGGT CGACGTGGAC ACCGAGGACG ACGAGCTCGA TGGCGACGAG
CCGAAGGCCG ACGAGCTGGA TCAGGGCGAC GACGATGTGC TGATCCTCTC CGATGACGAC
GACGACGCGC CTTCCGCCCA GGTGGCGGCG GCGGGCGCGA CAGCCGACCC GGTCAAGGAC
TACCTCAAGC AGATCGGCAA GGTGCCCCTG CTCAACGCCG AGCAGGAGGT CGAGCTCGCC
AAGCGGATCG AGGCCGGTCT GTTCGCCGAG GAACAGCTCG CCAAGGAGGG CGACAAGCTG
CCGCCCGACG TCAAGGCCGA GCTGGAGTGG ATCGCCGAGG ACGGCAAGCG GGCGAAGAAC
CACCTGCTCG AGGCGAACCT GCGGCTCGTG GTGTCGCTCG CCAAGCGGTA CACGGGCCGG
GGCATGCTCT TCCTCGACCT CATCCAGGAG GGGAACCTCG GCCTGATCCG CGCGGTCGAG
AAGTTCGACT ACACCAAGGG CTACAAGTTC TCGACGTACG CGACGTGGTG GATCCGGCAG
GCGATCACCC GGGCCATGGC GGACCAGGCG CGCACCATCC GGATCCCGGT GCACATGGTC
GAGGTGATCA ACAAGCTCGC CCGCGTGCAG CGGCAGATGC TCCAGGACCT CGGCCGCGAG
CCCACCCCGG AGGAGCTCGC CCGCGAGCTC GACATGACCC CCGAGAAGGT CATCGAGGTC
CAGAAGTACG GCCGCGAGCC CATCTCCCTG CACACGCCGC TGGGCGAGGA GGGCGACAGC
GAGTTCGGCG ACCTGATCGA GGATTCCGAG GCCGTCGTCC CCGCCGACGC CGTCAGCTTC
ACGCTCCTGC AGGAGCAGCT CCACTCGGTC CTCGACACCC TGTCGGAGCG GGAGGCGGGC
GTCGTTTCGA TGCGGTTCGG CCTCACCGAC GGGCAGCCGA AGACCCTCGA CGAGATCGGC
AAGGTCTACG GCGTGACGCG GGAGCGGATC CGGCAGATCG AGTCCAAGAC CATGTCGAAG
CTGCGGCACC CCTCCCGGTC CCAGGTGCTC CGCGACTACC TCGACTGA
 
Protein sequence
MIQQLLERGR AQGFLESEDV RKAFEEADIP MSRAAGVLRS LSKEGVTVVV TAADAAAPKR 
KRRSTSSAKK TTKSAAAKDP QPETVTAVVT DSTSTKSTSK KSSSKSTSSK STSAKSASAK
STTAKSTTTK SRSKSTKAAA EKPAAAKSKA EGTTATTSRA SKAKAETKAA KPVDLVDIDD
DLDLDADVDI DDFDLDVDVD LDSDLEVDVD TEDDELDGDE PKADELDQGD DDVLILSDDD
DDAPSAQVAA AGATADPVKD YLKQIGKVPL LNAEQEVELA KRIEAGLFAE EQLAKEGDKL
PPDVKAELEW IAEDGKRAKN HLLEANLRLV VSLAKRYTGR GMLFLDLIQE GNLGLIRAVE
KFDYTKGYKF STYATWWIRQ AITRAMADQA RTIRIPVHMV EVINKLARVQ RQMLQDLGRE
PTPEELAREL DMTPEKVIEV QKYGREPISL HTPLGEEGDS EFGDLIEDSE AVVPADAVSF
TLLQEQLHSV LDTLSEREAG VVSMRFGLTD GQPKTLDEIG KVYGVTRERI RQIESKTMSK
LRHPSRSQVL RDYLD