| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_2398 |
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| Symbol | |
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| ID | 9168902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobispora bispora DSM 43833 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014165 |
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| Strand | - |
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| Start bp | 2793231 |
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| End bp | 2794898 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | RpoD subfamily RNA polymerase sigma-70 |
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| Protein accession | YP_003652995 |
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| Protein GI | 296270363 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.107802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCAGC AGCTTCTCGA GCGTGGGCGC GCGCAGGGAT TCCTCGAGTC CGAGGATGTC
CGTAAGGCCT TCGAGGAGGC GGACATCCCG ATGTCGCGTG CCGCTGGAGT CCTGCGCAGC
CTCAGCAAGG AGGGTGTGAC CGTCGTGGTG ACGGCCGCGG ATGCGGCGGC GCCGAAGCGC
AAGCGCCGTT CGACCTCGTC CGCGAAGAAG ACCACGAAGT CCGCCGCGGC CAAGGATCCA
CAGCCTGAGA CGGTCACTGC CGTGGTGACC GACTCCACCT CGACCAAGTC GACGTCGAAG
AAGTCCTCGA GCAAGTCGAC GTCGAGCAAG TCCACCTCGG CGAAGTCGGC TTCGGCCAAG
TCCACGACGG CCAAGTCGAC GACGACGAAG TCGAGGTCCA AGTCGACGAA GGCGGCGGCC
GAGAAGCCGG CCGCGGCGAA GAGCAAGGCC GAGGGCACCA CGGCGACCAC GTCCAGGGCC
TCCAAGGCGA AGGCCGAGAC CAAGGCGGCC AAGCCCGTCG ACCTGGTCGA CATCGACGAC
GATCTCGATC TCGATGCCGA TGTCGACATC GACGACTTCG ACCTCGACGT CGATGTCGAT
CTCGACAGCG ACCTCGAGGT CGACGTGGAC ACCGAGGACG ACGAGCTCGA TGGCGACGAG
CCGAAGGCCG ACGAGCTGGA TCAGGGCGAC GACGATGTGC TGATCCTCTC CGATGACGAC
GACGACGCGC CTTCCGCCCA GGTGGCGGCG GCGGGCGCGA CAGCCGACCC GGTCAAGGAC
TACCTCAAGC AGATCGGCAA GGTGCCCCTG CTCAACGCCG AGCAGGAGGT CGAGCTCGCC
AAGCGGATCG AGGCCGGTCT GTTCGCCGAG GAACAGCTCG CCAAGGAGGG CGACAAGCTG
CCGCCCGACG TCAAGGCCGA GCTGGAGTGG ATCGCCGAGG ACGGCAAGCG GGCGAAGAAC
CACCTGCTCG AGGCGAACCT GCGGCTCGTG GTGTCGCTCG CCAAGCGGTA CACGGGCCGG
GGCATGCTCT TCCTCGACCT CATCCAGGAG GGGAACCTCG GCCTGATCCG CGCGGTCGAG
AAGTTCGACT ACACCAAGGG CTACAAGTTC TCGACGTACG CGACGTGGTG GATCCGGCAG
GCGATCACCC GGGCCATGGC GGACCAGGCG CGCACCATCC GGATCCCGGT GCACATGGTC
GAGGTGATCA ACAAGCTCGC CCGCGTGCAG CGGCAGATGC TCCAGGACCT CGGCCGCGAG
CCCACCCCGG AGGAGCTCGC CCGCGAGCTC GACATGACCC CCGAGAAGGT CATCGAGGTC
CAGAAGTACG GCCGCGAGCC CATCTCCCTG CACACGCCGC TGGGCGAGGA GGGCGACAGC
GAGTTCGGCG ACCTGATCGA GGATTCCGAG GCCGTCGTCC CCGCCGACGC CGTCAGCTTC
ACGCTCCTGC AGGAGCAGCT CCACTCGGTC CTCGACACCC TGTCGGAGCG GGAGGCGGGC
GTCGTTTCGA TGCGGTTCGG CCTCACCGAC GGGCAGCCGA AGACCCTCGA CGAGATCGGC
AAGGTCTACG GCGTGACGCG GGAGCGGATC CGGCAGATCG AGTCCAAGAC CATGTCGAAG
CTGCGGCACC CCTCCCGGTC CCAGGTGCTC CGCGACTACC TCGACTGA
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| Protein sequence | MIQQLLERGR AQGFLESEDV RKAFEEADIP MSRAAGVLRS LSKEGVTVVV TAADAAAPKR
KRRSTSSAKK TTKSAAAKDP QPETVTAVVT DSTSTKSTSK KSSSKSTSSK STSAKSASAK
STTAKSTTTK SRSKSTKAAA EKPAAAKSKA EGTTATTSRA SKAKAETKAA KPVDLVDIDD
DLDLDADVDI DDFDLDVDVD LDSDLEVDVD TEDDELDGDE PKADELDQGD DDVLILSDDD
DDAPSAQVAA AGATADPVKD YLKQIGKVPL LNAEQEVELA KRIEAGLFAE EQLAKEGDKL
PPDVKAELEW IAEDGKRAKN HLLEANLRLV VSLAKRYTGR GMLFLDLIQE GNLGLIRAVE
KFDYTKGYKF STYATWWIRQ AITRAMADQA RTIRIPVHMV EVINKLARVQ RQMLQDLGRE
PTPEELAREL DMTPEKVIEV QKYGREPISL HTPLGEEGDS EFGDLIEDSE AVVPADAVSF
TLLQEQLHSV LDTLSEREAG VVSMRFGLTD GQPKTLDEIG KVYGVTRERI RQIESKTMSK
LRHPSRSQVL RDYLD
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