Gene Tbis_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_2387 
Symbol 
ID9168891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp2781246 
End bp2783771 
Gene Length2526 bp 
Protein Length841 aa 
Translation table11 
GC content73% 
IMG OID 
ProductDNA topoisomerase 
Protein accessionYP_003652984 
Protein GI296270352 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0699814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.399735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGATA TGCCGCGACG CACCACAGCC CCCGACCAGG ACTTCCAGGA GCGGATCGTC 
GACATCGACG TCGCCGCCGA GATGCGGACG AGCTTCCTGG AGTACGCCTA CTCGGTCATC
TACCAGCGCG CGCTCCCCGA CGCCCGGGAC GGGCTGAAGC CGGTGCAGCG CCGGATCCTC
TACTCGATGA GCGAGATGGG CCTGCGGCCC GACCGGGGGC ATGTGAAGTC CTCCCGCGTC
GTCGGCGAGG TCATGGGCAA GCTGCACCCG CACGGGGACG CCGCGATCTA CGACGCGCTC
GTCCGCATGG CCCAGCCGTT CTCGATGCGG CTGCCGCTGG TCGACGGCCA CGGGAACTTC
GGGTCGCCGG ACGACGCCCC CGCGGCGATG CGGTACACCG AGGCCCGCCT CGCCCCGGCG
GCGATGCTGA TGGTGCAGTC GATCGACGAG GAGACCGTCG ACTTCCGGCC CAACTACGAC
GGCCAGGAGA CCGAGCCGGC GGTCCTCCCC GCGGCCTTCC CCAACCTCCT GGTCAACGGT
GCGTCCGGCA TCGCGGTCGG CATGGCGACC AACATCCCGC CGCACAACCT CGCCGAGGTG
ATCGGGGCCG CCCGCCACCT GCTGAAGAAG CCGGACGCCA CCCTCGACGA GCTCATGCAG
TTCGTCCCCG GCCCCGACCT GCCCACCGGC GGGCTGATCA TCGGCCTGGA CGCCATCCGG
GAGGCGTACG AGACCGGGCG GGGCACGTTC CGGATGCGCG CGCGGGCGAC CATCGAGAAC
GTGACCGCGC GGCGCAAGGC GATCGTGGTG ACCGAGCTGC CGTTCAACGT CGGTCCCGAG
CGCGTGGTCG CGAAGATCAA GGAGCTGGTC CAGGCGAAGA AGCTCGTCGG CATCGCCGAC
CTGAAGGACC TCACCGACCG GCACAAGGGC CTGCGCCTCG TCATCGAGGT CAAGACCGGG
TTCAACCCCG AGGCGGTGCT GGAAGAGCTC TATCGGCTCA CGCCGATGGA GGAGACGTTC
GGCATCAACA GCGTCGCGCT CGTCGACGGG CAGCCGCGCA CGCTCGGCCT GCGCGACCTG
CTCGCCGTGT ACGTGAACCA CCGGCTCGAG GTGGTGCGCC GGCGGTCGGC GTACCGGCGG
CGCAAGCGCG AGGAGCGCCT CCACCTGGTC GAGGGCCTCA TCACCGCGCT GCTCAACATC
GACGAGGTCA TCCAGGTGAT CCGCACCTCG GACGACCCGG CGCACGCGCG GAGCAGGCTC
ATGGAGACGT TCGGGCTGTC GGAGGCCCAG GCCGGGTACA TCCTCGACAC CCCGCTGCGC
CGGCTCACCC GCTACGACAA GCTGGAGCTC GAGCGGGAGA AGGAGGGGCT GCAGGCCGAG
ATCGCCGAGC TCAACGCGAT CCTTGGCTCG GAGGACCGGC TGCGCCGGGT GGTGTCGAAG
GAGCTCGCCG AGGTCGCCAA GAAGTACGGC ACGCCGCGCC GGACCCAGCT GCTCGACTCG
GCCGAGGCCG CGCTGAAGAC GGCGATCCCG CTCGAGGTGG CCGACGACCC CTGCCTGGTG
CTGCTCTCCT CGACCGGCCT GATCGCCCGG ACCGCGGACG CGTCCCCGCT CCCCGGCGAT
GGGCCGCGCG CGCCGCACGA CGTGCTGGTC TCGGCAGTGC GCACGACGGT CCGGGGCGAG
GTCGGTGTGA TCACCTCCAA GGGGCGGATG ATCCGGGTGT CCGTGGTCGA GCTGCCCACG
CTGCCCGCGT CCGGTGATCC GCCGTCGCTC GCCGGGGCGC AGCCGGTGAC CGAGTACGTG
ACCCTGGAGC CGGACGAGCA CGTCGTCGGG CTCGGCTCGC TGGACGAGGC GGGGCACGGG
ATCGCGCTCG GCACCGCGCA GGGCGTGGTC AAGCGGGTCG CCCCCGACTA TCCGGTCAAC
CGGGACGACT TCGAGATCAT CAGCCTGCGC GAGGGTGACC GCGTGGTCGG CGCGGTCGAG
CTGGAGTCCC CCGATCACGA CCTGGTCTTC ATCACCTCCG ACGCCCAGCT GCTCCGCTTC
CCCGCCGCCA CGGTCCGGCC GCAGGGCCGC CCGGCCGGTG GTGTGGCCGG GATCCGGCTC
GCCGAGGGCG CCCGGGTGAT CTGGTTCGGC GCGGTCGACC CGGCGCGGGA GTCGCGCGTC
GTCACGGTCG CCGGCTCGTC GACCGCCCTG CCCGGGACCC AGACGGGCAC GGTGAAGGTC
TCCGACTACG CCGTGTTCCC GCCGAAGGGC CGGGCGACCG GCGGGGTCCG CGCGCAGCGC
TTCCTCAAGG GCGAGGACGT GCTCCTGCTC GCCTGGGCCG GGCCCGCACC GGCCAAGGCG
ATCTCGCCGT CCGGGCAACC GGTCGAGCTC CCCGCCGAGC TCGGCCGGCG CGACGGCTCG
GGGACCCGCC TCATGCACCG GATCGCCGCG ATCGGCGGCG CCATCGGAGC GGCCCCGCCC
GCTCGCCCGG CCGAGGACCG GGCGGAGGAG GCGGCGCCGG CCCCCGATGC CGGCACCGCC
GAGTAG
 
Protein sequence
MFDMPRRTTA PDQDFQERIV DIDVAAEMRT SFLEYAYSVI YQRALPDARD GLKPVQRRIL 
YSMSEMGLRP DRGHVKSSRV VGEVMGKLHP HGDAAIYDAL VRMAQPFSMR LPLVDGHGNF
GSPDDAPAAM RYTEARLAPA AMLMVQSIDE ETVDFRPNYD GQETEPAVLP AAFPNLLVNG
ASGIAVGMAT NIPPHNLAEV IGAARHLLKK PDATLDELMQ FVPGPDLPTG GLIIGLDAIR
EAYETGRGTF RMRARATIEN VTARRKAIVV TELPFNVGPE RVVAKIKELV QAKKLVGIAD
LKDLTDRHKG LRLVIEVKTG FNPEAVLEEL YRLTPMEETF GINSVALVDG QPRTLGLRDL
LAVYVNHRLE VVRRRSAYRR RKREERLHLV EGLITALLNI DEVIQVIRTS DDPAHARSRL
METFGLSEAQ AGYILDTPLR RLTRYDKLEL EREKEGLQAE IAELNAILGS EDRLRRVVSK
ELAEVAKKYG TPRRTQLLDS AEAALKTAIP LEVADDPCLV LLSSTGLIAR TADASPLPGD
GPRAPHDVLV SAVRTTVRGE VGVITSKGRM IRVSVVELPT LPASGDPPSL AGAQPVTEYV
TLEPDEHVVG LGSLDEAGHG IALGTAQGVV KRVAPDYPVN RDDFEIISLR EGDRVVGAVE
LESPDHDLVF ITSDAQLLRF PAATVRPQGR PAGGVAGIRL AEGARVIWFG AVDPARESRV
VTVAGSSTAL PGTQTGTVKV SDYAVFPPKG RATGGVRAQR FLKGEDVLLL AWAGPAPAKA
ISPSGQPVEL PAELGRRDGS GTRLMHRIAA IGGAIGAAPP ARPAEDRAEE AAPAPDAGTA
E