| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_2330 |
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| Symbol | |
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| ID | 9168833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobispora bispora DSM 43833 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014165 |
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| Strand | - |
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| Start bp | 2711636 |
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| End bp | 2715583 |
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| Gene Length | 3948 bp |
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| Protein Length | 1315 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_003652933 |
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| Protein GI | 296270301 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.740295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACGC TCGCCGATCT CCACAGCCGT CTGCAGGATC TCATGCCGCG CGACCGGCAC
CGGTTGCGCC GCCGACTCAA CGGCGTCCGC AAGATCCGCG ATGGCGGGGC CCGCCGCGCG
GTGATCGGTG AGATAGCCGC GGAGCTCGAG GCGGCGCAGC GCCGGGTCGA GGCCCGGCGG
GCCGCGGTGC CGCCGATCGT CTACCCCCCG GAGCTGCCCG TCGTCCAGCG CAAGGACGAC
CTGCTCGCGG CCGTGCGCGA CCACCAGGTC GTGATCGTGG CGGGGGAGAC CGGCTCCGGA
AAGACCACGC AGCTCCCCAA GATCTGCCTC GAGCTCGGCC GCGGGGTGCA CGGCGCGATC
GGGCACACCC AGCCCCGGCG CATCGCCGCG CGCTCCGTGG CCGCGCGCAT CGCCGAGGAG
CTCGGGGTCC CGCTCGGCGA CGCGGTCGGT TACAAGGTGC GGTTCACCGA CCGCTCGAGC
GACGGGACGC TCATCAAGCT GATGACCGAC GGCATCCTGC TCGCCGAGCT GCAGTCGGAC
CCGCTGCTCC TGCAGTACGA CACGATCATC ATCGACGAGG CGCACGAGCG CAGCCTCAAC
ATCGACTTCA TCCTCGGCTA CCTCAAGCGG ATCCTCCCCC GGCGGCCGGA CCTCAAGGTG
ATCATCACCT CGGCCACCAT CGACCCGGAG AGCTTCGCCC GGCACTTCCG CGGCCCCGAC
GGGGAGCCGG CGCCGATCAT CGAGGTCTCC GGGCGGACCT ACCCGGTCGA GGTGCGGTAC
CGGCCGATCG GCGAGGACGA GGACCAGACC CAGGCCATCG TCAACGCGGT CGACGAGCTC
TGCGCGGCCG GACCGGGCGA CATCCTCGTC TTCCTCAGCG GCGAGCGGGA GATCCGCGAC
ACCGCCGACG CGCTCAAGGG GCGGCCGGAG GAGGTCCTCC CGCTGTACGC GCGGCTCTCC
ACCGCCGAGC AGCAGCGGGT GTTCCAGCCG CACCGGGGGC GGCGCATCGT GCTCGCCACC
AACGTCGCCG AGACGTCGCT CACCGTGCCC GGCATCCGGT ACGTCATCGA CCCGGGCACG
GCGCGGATCT CCCGGTACAG CAACCGGCTC AAGGTGCAGC GGCTGCCCAT CGAGCCGATC
TCGCAGGCCT CCGCCGACCA GCGCAAGGGC CGGTGCGGCC GGACCTCCGA CGGCATCTGC
ATCCGGCTCT ACAGCGAGGA GGACTTCAAC TCCCGGCCGC GGTTCACCGA CCCGGAGATC
CTCCGCACCA ACCTCGCCAG CGTCATCCTG CAGATGGCCG CGCTCAAGCT CGGCGACGTC
GCCGAGTTCC CGTTCGTCGA CCCGCCGGAC CCCCGGCAGA TCAGGGACGC CTACGCGCTC
CTCCACGAGC TCGGCGCCAT CGAGCAGGTA CCCGGGGCGC AGCAGCGCGA GGTGCGGCTC
ACCCCGATCG GGCGGAAGCT CGCCCAGCTC CCGGTGGACC CCCGGCTGGG CCGCATGGTG
CTCGAGGCCG GCCGGAACGG CTGCGCGCGC GAGGTCATCA TCATCGCCGC CGCCCTCTCC
ATCCAGGACC CCCGCGAGCG GCCCGCCGAC AACCAGCAGG CGGCGGACGA GAAGCACCGC
CGCTTCGCCG ACAAGGAGTC GGACTTCCTC ACCTTCCTCA ACCTCTGGCG GTACCTGCAG
GAGCGGCAGC GGGAGCTCTC CTCGAGCGCC TTCCGGCGGA TGTGCAAGGC CGAGTACCTC
AACTACCTGC GGGTCCGGGA GTGGCAGGAC ATCGTCAGCC AGCTCACCGA GGTGGCCACC
TCGCTCGGCA TCGTGCTGAA CAGCGCCGAC GCCGACCCCG ACCGGATCCA CCAGTCGCTC
CTCGCCGGGC TGCTCTCGCA CATCGGCCTG AAGGACCTCG ACACCAAGCG CCGCCAGGAC
GGACGCCGGC CGATCACCGA GTACCTCGGC GCCCGCGGCG CCCGCTTCGC GATCTTCCCC
GGCTCCGCGC TCGCCAAGGC GCAGCCCACC TGGGTGATGT CGGCCGAGCT CGTGGAGACC
TCCCGGCTCT GGGGCCGGAT CAACGCGAAG ATCAAACCGG AGTGGGTCGA GCCGCTCGCC
CAGCACCTGG TCAAGCGGAG CTACAGCGAG CCGCACTGGG ACCCGGAGCA GGCCGCCGTC
ATCGCCTTCG AGAAGGTCAC CCTGTACGGC GTGCCGATCG TGACCGAGCG CAAGGTCAAT
TACGGGCGGA TCGACCCGGA GCTGAGCCGG GAGCTCTTCA TCCGCCACGC GCTGGTCGAG
GGCGACTGGC GCACCCACCA CAAGTTCTTC CACGCCAACC GGCGGCTGCT GCAGGAGGTC
GAGCGGCTCG AGGAGAAGGC CCGGCGCCGG GACATCCTCG TCGACGACGA GACGCTGTTC
GACTTCTACG ACCGGCGGAT CCCCGCCGAG GTGGTCTCCG GCCGGCACTT CGACGCCTGG
TGGAAGAAGG CGTCGAAGGA GAACCCCGAC CTGCTCACCT TCACCCCGGA GATGCTGATC
AACGAGGGCG CCGGGGTGCG GGAGGAGGAC TACCCGGACA CGTGGCGGCA CAACGGGCAC
CGGATGCGGC TCACCTACCG GTTCGACCCG GGCGCCGGGC TCGCCGAGGC GGTCCGGCGA
GGCGGCGGCC ACGACCGCGA CCGGGGCGCG GACGGGGTGA CCGTGCACAT CCCGCTCTCC
GTGCTCAACC AGGTCGACCC GACCGGGTTC GAGTGGCAGG TCCCGGGGCT GCGTGAGGAG
CTCATCACCG AGCTGATCAG GTCCCTGCCG AAGGACCTGC GGCGCAACTT CGTGCCGGCC
CCCGACTACG CCAAGAAGGT GCTGAGCCGG GTGCGGCCCG GGAGCGAGCC GCTGCTGGAC
GCGCTCGAGC GGGAGCTGTA CGAGCTGACC GGGGTGCGGG TGCCCCGCGA CGCCTGGAAC
CTCGAGCGGA TCCCCGACCA CCTGCGGATC ACCTTCCGGG TGGTCGACGA GCGCAAGCGC
ACGCTCGCCG AGAGCAAGGA CCTCACCGAG CTCAAGCGCA TCCTCGCCCC CCGGCTCCGG
GACACGCTCT CCAAGGCGGC CGAGGACCTC GAGCGGACCG GGCTGCGGAG CTGGACCATC
GGCACGCTGC CCAAGGTCTT CCAGCACGGG CGCATGCGGG CCTACCCGGC GCTCGTCGAC
GAGACCGACA GCGTCGCGGT CCGGATGTTC GAGACCGAGG ACGAGCAGCG CAAGGCGATG
TGGGCCGGGA CGCGGCGCCT GCTCATGCTC ACCACGGTCA ACCCGGCGAA GTCGATCCTC
CGCGGGCTCA CCACCGAGCA GAAGCTCACG CTCAGCCGGA GCCCGCACGG GAGCGCGGTG
GCGCTGTTCG ACGACTGCGT CGCCTGCGCG GTCGACGCGC TCATGGCCCA GGCCGGGGGA
CCGGCGTGGG ACGAGGAGGG CTTCCGCCGG CTCCACGATC ACGTGCGCGC CTCGCTCTAC
GAGACCGCGG AGGAGGTGGT CGCGCGGGTC GAGCGGGCGC TCGCGGCCTG GCACGAGGCG
TGCACCGCGC TCGCCGCGAT CGAGCGGGGC GGCCCGGCCG ACGTGGTCGC CGACGTCAAG
GGGCAGCTCG AGCGGCTCGT CTACCCGGGC TTCGTGACCG ACACCGGGTA TGACCGGCTG
CCGCACCTGG CCCGCTACCT GCGGGCGGTC ACCCGCCGGC TCGGCAAGCT CGGCGAGGAC
CCCTTCCGGG ACGGCGAGCG GATGCGCCAG GTGCAGGAGG TCGAGGACGC CTATGACGAG
CTGCTCGACC GGCTGGAGCC GCAGCACCGG GACGCGCCCG CCGTACGGGA GATCCGGTGG
ATGATCGAGG AGCTGCGGGT GAGCCTGTTC GCCCAGCAGC TCGGCACCCC GATCCCCGTG
TCCGAGAAGC GCATCCGCAA GGCCATGGAG CGGATCGCCG TGCCGTGA
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| Protein sequence | MDTLADLHSR LQDLMPRDRH RLRRRLNGVR KIRDGGARRA VIGEIAAELE AAQRRVEARR
AAVPPIVYPP ELPVVQRKDD LLAAVRDHQV VIVAGETGSG KTTQLPKICL ELGRGVHGAI
GHTQPRRIAA RSVAARIAEE LGVPLGDAVG YKVRFTDRSS DGTLIKLMTD GILLAELQSD
PLLLQYDTII IDEAHERSLN IDFILGYLKR ILPRRPDLKV IITSATIDPE SFARHFRGPD
GEPAPIIEVS GRTYPVEVRY RPIGEDEDQT QAIVNAVDEL CAAGPGDILV FLSGEREIRD
TADALKGRPE EVLPLYARLS TAEQQRVFQP HRGRRIVLAT NVAETSLTVP GIRYVIDPGT
ARISRYSNRL KVQRLPIEPI SQASADQRKG RCGRTSDGIC IRLYSEEDFN SRPRFTDPEI
LRTNLASVIL QMAALKLGDV AEFPFVDPPD PRQIRDAYAL LHELGAIEQV PGAQQREVRL
TPIGRKLAQL PVDPRLGRMV LEAGRNGCAR EVIIIAAALS IQDPRERPAD NQQAADEKHR
RFADKESDFL TFLNLWRYLQ ERQRELSSSA FRRMCKAEYL NYLRVREWQD IVSQLTEVAT
SLGIVLNSAD ADPDRIHQSL LAGLLSHIGL KDLDTKRRQD GRRPITEYLG ARGARFAIFP
GSALAKAQPT WVMSAELVET SRLWGRINAK IKPEWVEPLA QHLVKRSYSE PHWDPEQAAV
IAFEKVTLYG VPIVTERKVN YGRIDPELSR ELFIRHALVE GDWRTHHKFF HANRRLLQEV
ERLEEKARRR DILVDDETLF DFYDRRIPAE VVSGRHFDAW WKKASKENPD LLTFTPEMLI
NEGAGVREED YPDTWRHNGH RMRLTYRFDP GAGLAEAVRR GGGHDRDRGA DGVTVHIPLS
VLNQVDPTGF EWQVPGLREE LITELIRSLP KDLRRNFVPA PDYAKKVLSR VRPGSEPLLD
ALERELYELT GVRVPRDAWN LERIPDHLRI TFRVVDERKR TLAESKDLTE LKRILAPRLR
DTLSKAAEDL ERTGLRSWTI GTLPKVFQHG RMRAYPALVD ETDSVAVRMF ETEDEQRKAM
WAGTRRLLML TTVNPAKSIL RGLTTEQKLT LSRSPHGSAV ALFDDCVACA VDALMAQAGG
PAWDEEGFRR LHDHVRASLY ETAEEVVARV ERALAAWHEA CTALAAIERG GPADVVADVK
GQLERLVYPG FVTDTGYDRL PHLARYLRAV TRRLGKLGED PFRDGERMRQ VQEVEDAYDE
LLDRLEPQHR DAPAVREIRW MIEELRVSLF AQQLGTPIPV SEKRIRKAME RIAVP
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