Gene Tbis_2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_2253 
Symbol 
ID9168755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp2617322 
End bp2619433 
Gene Length2112 bp 
Protein Length703 aa 
Translation table11 
GC content71% 
IMG OID 
Productglycogen debranching enzyme GlgX 
Protein accessionYP_003652856 
Protein GI296270224 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.146745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAGG TCTGGCCTGG AGAGCCGTAT CCACTCGGCG CCACCTGGGA CGGTGTGGGC 
ACCAACTTCT CGGTGTTCTC GGAGGTCGCC GAGCGGGTCG AGCTGTGCCT GTTCGCCGAC
GACGGGACCG AGACCCGCGT CGACCTGCCC GAGACCGACG GGTTCGTCTG GCACGGCTAC
CTGCCGGGGA TCATGCCGGG CCAGCGGTAC GGCTACCGCG TGCACGGCCC CTACCGCCCC
GAGGAGGGCC ACCGGTGCAA CCCGGCCAAG CTGCTCCTCG ACCCGTACGC CAAGGCGGTC
GAGGGCTCGG TGCGGTGGCA TGAGGCGGTG TTCTCGTACC ACTTCGCCGA CGGCCGGCTG
AACACCGAGG ACTCGGCCCC GTACATGCCG AAGAACGTGG TGATCAACCC GTTCTTCGAC
TGGGGCGGCG ACCGCCGGCC CCGCACGCCG TACCACCAGA CGGTGATCTA CGAGGCGCAC
GTGCGCGGGC TCACCATGCG CCACCCGCAC GTGCCCGAGC GGCTCCGCGG CACCTACGCC
GGCCTGGCCC ACCCGGCGGT GATCGAGCAC CTGCTCTCCA TCGGCGTGAC CGCGGTCGAG
CTCATGCCGG TCCACCAGTT CGTGCCGGAG CACGCCCTGG TCTCCCGCGG GCTCACCAAC
TACTGGGGCT ACAACACCAT CGCCTACCTC GCCCCGCACA ACGCGTACTC CAGCTCCGGG
CAGCGGGGGG AGCAGGTCCT GGAGTTCAAG GCGATGGTCC GGGCGCTGCA CGAGGCCGGG
ATCGAGGTCA TCCTCGACGT GGTGTACAAC CACACGGCCG AGGGCGACCA CCGCGGGCCC
ACGCTCGGCT TCCGCGGCAT CGACAACGCC GCCTACTACC GGCTGCAGGA GGACGACCGG
CGGTTCTACG TCGACTACAC CGGGTGCGGC AACTCGCTCA ACGTGCGCCA CCCGCACGCG
CTCCAGCTCA TCATGGACTC GCTCCGCTAC TGGGTGCTGG AGATGCACGT CGACGGCTTC
CGGTTCGACC TCGCCGCCGC CCTCGCCCGG GAGCTGCACG ACGTGGACCG GCTCTCGGCG
TTCTTCGACA TCATCCAGCA GGACCCGGTG ATCTCCCAGG TGAAGCTGAT CGCCGAGCCG
TGGGACGTGG GGCCGGGCGG CTACCAGGTG GGGAACTTCC CCCCGTTATG GACGGAGTGG
AACGGCAAGT ACCGGGACAC CGTCCGGGAC TTCTGGCGGG GCACCGCCGG GGCCCTCCCG
GACTTCGCGT CCCGGCTCGC CGGGTCGAGC GACCTGTACG CCCACAACGG GCGGCGGCCG
GTCGCCTCGA TCAACTTCGT CACCTGCCAC GACGGGTTCA CCCTCACCGA CCTGGTCTCC
TACGACCGCA AGCACAACGA GGCGAACGGC GAGGACAACC GGGACGGCAC CGACGACAAC
CGCTCGTGGA ACTGCGGGGC CGAGGGCCCG GTCGACGACC CGGAGATCAA CCGGCTGCGC
CGGAGGCAGC GGCGCAACTT CCTCGCCACC CTGTTCGTCT CCCAGGGTGT CCCCATGGTG
CTCGCCGGCG ACGAGATCGG CCGCACCCAG CACGGCAACA ACAACGCCTA CTGCCAGGAC
AACGAGCTGT CGTGGGTGGA CTGGTCGCTG GTGGAGCGGG AGCGCGACCT GCTCGAGTTC
GTGCGCTCGC TCGCCGCGCT CCGCCGCCGT CACCCGGTCT TCCGGCGGCG CCGGTTCTTC
CGCGGCACGG GCGGCGACGG CACCCGCGAC GTCGTCTGGC TCACCCCGGC GGGGGCCGAG
ATGCGCGAGG CGGACTGGCA CAACGGCGCA AGGTCGCTGG CGGTGTTCCT CAACGGCGAC
GCGATCAGCG AGCCGGGGCC GCGCGGCGAG CGGATCCGGG ACGACTCCTT CCTGCTGCTG
TTCAACGCGC ACCACGAGCC GGTCACCTTC ACCCTCCCCG GCTCCGAGTA CGGCCCGGGC
TGGGAGGCGG TGATCGACAC GGCGGAGGAG ACCGGGCGCG GCAGCGGCGA GGTACGGCCG
GCCGGGGCGC TGGTGTGCGT CACCGGCCAC TCGCTGCAGA TCCTCCGCGG CACCGCGCGG
CCCGCGGGCT GA
 
Protein sequence
MHEVWPGEPY PLGATWDGVG TNFSVFSEVA ERVELCLFAD DGTETRVDLP ETDGFVWHGY 
LPGIMPGQRY GYRVHGPYRP EEGHRCNPAK LLLDPYAKAV EGSVRWHEAV FSYHFADGRL
NTEDSAPYMP KNVVINPFFD WGGDRRPRTP YHQTVIYEAH VRGLTMRHPH VPERLRGTYA
GLAHPAVIEH LLSIGVTAVE LMPVHQFVPE HALVSRGLTN YWGYNTIAYL APHNAYSSSG
QRGEQVLEFK AMVRALHEAG IEVILDVVYN HTAEGDHRGP TLGFRGIDNA AYYRLQEDDR
RFYVDYTGCG NSLNVRHPHA LQLIMDSLRY WVLEMHVDGF RFDLAAALAR ELHDVDRLSA
FFDIIQQDPV ISQVKLIAEP WDVGPGGYQV GNFPPLWTEW NGKYRDTVRD FWRGTAGALP
DFASRLAGSS DLYAHNGRRP VASINFVTCH DGFTLTDLVS YDRKHNEANG EDNRDGTDDN
RSWNCGAEGP VDDPEINRLR RRQRRNFLAT LFVSQGVPMV LAGDEIGRTQ HGNNNAYCQD
NELSWVDWSL VERERDLLEF VRSLAALRRR HPVFRRRRFF RGTGGDGTRD VVWLTPAGAE
MREADWHNGA RSLAVFLNGD AISEPGPRGE RIRDDSFLLL FNAHHEPVTF TLPGSEYGPG
WEAVIDTAEE TGRGSGEVRP AGALVCVTGH SLQILRGTAR PAG