Gene Tbis_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_2013 
Symbol 
ID9168507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp2332272 
End bp2333081 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content76% 
IMG OID 
Producthemolysin A 
Protein accessionYP_003652618 
Protein GI296269986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0478155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGGG TTCGGCTCGA CCGGGAGCTG GTGCGCCGCG GGCTCGCCCG GTCCCGGGAG 
CACGCCGCCC GGCTGATCGA GGCCGGCCGG GTGTACGTGC GCGGCTCCGT GGCGGAGAAG
CCGGCGACGC AGGTGGACAC CGGGGCCCCC ATCGTGGTCG CCGAGGCGGC CGAGGGCCCC
GAGTACGTGT CCCGGGGCGC GTACAAGCTC CTCGGCGCGC TCGAGGCCTT CACCGGGCTC
CAGGTGGCCG GCCGCCGCTG CCTCGACGCC GGCGCCTCGA CCGGGGGGTT CACCGACGTG
CTGCTCCGGC ACGGCGCGGC CCACGTGATC GCGGTCGACG TCGGGTACGG CCAGCTCGCC
TGGTCGCTGC GGACCGATGA GCGGGTGACC GTGCTGGAGC GGGTGAACGT CCGCGACCTC
ACCCCGGAGA TGGTCGGCGA GCCGCCCACG CTCATCGTGG GCGACCTGTC GTTCATCTCG
CTCCGGCTGG TCCTGCCCGC CCTGGTGCGG TGCGCGGCCG GCACCGCCGA CTTCGTGCTG
CTGGTCAAGC CGCAGTTCGA GGTGGGCAAG GGCCGGGTCG GCCCCGGCGG CGTGGTCCGG
GACCCGGCGC TGCGGGCCGA GGCGGTCCGG GACGTGGCCA CCGCGGCGCA GGGGCTCGGC
CTCACCGTGA AGGGGGTGAC CGCGAGCCCG CTGCCCGGAC CGGCGGGCAA CGTGGAATAC
CTCCTGTGGC TGGGGAAGGG GCCGGGCCAT GAGGCGGTGC CCGACCTGGA CGCGGCCATC
GAGCGAGCGG TGGCCGAGGG ACCCCGGTGA
 
Protein sequence
MTRVRLDREL VRRGLARSRE HAARLIEAGR VYVRGSVAEK PATQVDTGAP IVVAEAAEGP 
EYVSRGAYKL LGALEAFTGL QVAGRRCLDA GASTGGFTDV LLRHGAAHVI AVDVGYGQLA
WSLRTDERVT VLERVNVRDL TPEMVGEPPT LIVGDLSFIS LRLVLPALVR CAAGTADFVL
LVKPQFEVGK GRVGPGGVVR DPALRAEAVR DVATAAQGLG LTVKGVTASP LPGPAGNVEY
LLWLGKGPGH EAVPDLDAAI ERAVAEGPR