| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_1999 |
|---|
| Symbol | |
|---|
| ID | 9168493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | - |
|---|
| Start bp | 2314939 |
|---|
| End bp | 2317779 |
|---|
| Gene Length | 2841 bp |
|---|
| Protein Length | 946 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | excinuclease ABC subunit A |
|---|
| Protein accession | YP_003652604 |
|---|
| Protein GI | 296269972 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0576024 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.88061 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGATC GCCTTATCGT GCGTGGCGCA CGAGAGCACA ACCTGAAGGA CGTCTCGCTG
GACCTGCCGC GGGACGCGCT GATCGTATTC ACGGGCCTGT CCGGCTCGGG CAAGTCCAGC
CTGGCCTTCG ACACGATCTT CGCGGAGGGG CAGCGGCGGT ACGTCGAGTC GCTCTCCGCC
TACGCCCGCC AGTTCCTCGG GCAGCTCGAC AAGCCCGACG TCGACTTCAT CGAGGGCCTC
TCCCCGGCCG TCTCCATCGA CCAGAAGTCG ACCAGCCGCA ACCCGCGCTC GACCGTCGGG
ACGATCACCG AGGTCTACGA CTACCTCCGG CTGCTCTGGG CGCGGATCGG CAAGCCGCAC
TGCCCGAGCT GCGGCCGTCC CATCGCCAAG CAGACCCCGC AGCAGATCGT CGACCGGGTG
CTCGAGCTCC CGGAGGGCAC CCGGTTCCAG GTGCTCGCGC CGGTGATCCG CGGCCGCAAG
GGAGAGTACG GCGAGCTGTT CCGCGAGCTC CAGACCAAGG GGTTCGCCCG GGCCCGGGTC
GACGGCCAGG TGATCCGGCT GGAGGAGCCG CCGGCGCTGA AGAAGTACGA GAAGCACACC
ATCGAGGTGA TCGTCGACCG GCTCGTGGTC AAGGAGAGCG CCCGGCGCCG GCTCACCGAC
TCGGTGGAGA CCGCGCTGCG GCTCTCCGGC GGCACGGTCA TGCTCGACTT CGTCGACCTG
CCGGAGGACG ACCCGAACCG GGAGCGGCTC TACTCCGAGC ACCTGTACTG CCCCTACGAC
GACCTCTCGT TCGAGGAGCT GGAGCCCCGG TCGTTCTCGT TCAACTCGCC CTTCGGGGCG
TGCCCCGAGT GCACCGGCCT CGGCACCCGG ATGGAGGTCG ACCCCGAGCT GGTCGTCCCC
GACCCGGAGC GGACGCTCGG CGAGGGGGCG GTCAGCCCGT GGGCGAACGG GCACACCAGC
GACTACTTCA CCCGCCTGCT CGAGGCGCTC GGCCACGCGA TGGGGTTCGA CCTCGACACC
CCGTGGCATC GGCTGCCGAA GAAGGCGCAG AAGGCGATCC TCTACGGCTA CGACGAGCAG
GTCCACATCC GGTACCGCAA CCGCTACGGC CGGGAGCGCT CCTACTACAC CACGTTCGAG
GGCGTGATCC CGTGGGTGCA GCGCCGGCAC GCCGAGGCCG AGAGCGACGT CGGCCGGGAG
CGGTTCGAGG GGTACATGCG CCAGGTGCCC TGCCCGGCCT GCAAGGGCCG GCGGCTCAAG
CCGGTCTCGC TCGCCGTGAC GGTCGGCGGC AAGTCCATCG CCGACGTCTC GGCGATGTCC
ATCGCGGAGT GCGCGGCCTT CCTCAGCGAC CTGCGGCTCA GCCCACGGGA CGCGCAGATC
GCCGAGCGGG TGATCAAGGA GATCAAGGCG CGGCTCGGGT TCCTCCTCGA CGTGGGGCTC
GACTACCTGA CCCTCGACCG CCCGGCCGCG ACCCTCGCGG GCGGCGAGGC GCAGCGCATC
CGGCTCGCCA CCCAGATCGG CTCCGGGCTC GTCGGCGTGC TCTACGTGCT CGACGAGCCG
TCCATCGGCC TCCACCAGCG GGACAACCAG CGGCTGCTGG ACACCCTGCT CAAGCTCCGG
GACATGGGCA ACACGCTGAT CGTCGTCGAG CACGACGAGG ACACGATCGC GGCGGCCGAC
TGGGTGGTGG ACATCGGCCC GGGCGCGGGC GAGCACGGCG GGCAGATCGT GGTCTCCGGC
ACCGTCCAGG ACCTGATCGC CTGCGAGGAG TCGATCACCG GCGCGTACCT GTCCGGCCGC
CGGAGGATCG ACATACCGGA GCGGCGGCGG CCGCGGGACA AGAAGCGGCA GCTCGTGGTG
AAGGGCGCGC GCGAGCACAA CCTCGCCGGC ATCGACGTGG AGTTCCCGCT CGGCGTGTTC
ACCGCGGTGA CCGGGGTGTC CGGGTCGGGC AAGTCCACGC TCGTCAACGA CATCCTGTAC
AACGCGCTCG CCAAGGAGCT GCACGGCGCG CGCACCGTGC CCGGCCGCCA CTCGCGGATC
ACCGGCATCG AGCTGGTGGA CAAGGTGGTG CACGTCGACC AGTCGCCGAT CGGCCGTACC
CCGAGATCGA ACCCGGCGAC CTACACCGGG GTCTTCGACC ACGTGCGGAA GCTCTTCGCC
GCCACCACCG AGGCGAAGGT CCGCGGCTAC CAGCCCGGGC GGTTCAGCTT CAACATCAAG
GGCGGCCGCT GCGAGGCCTG CGCCGGCGAC GGCACCATCA AGATCGAAAT GAACTTCCTG
CCGGACGTCT ACGTGCCCTG CGAGGTCTGC CACGGGGCCC GGTACAACCG GGAGACCCTG
GAGGTCCGCT ACAAGGGCAA GACGATCGCC GACGTCCTCG ACATGCCGAT CGAGGAGGCG
CTCGAGTTCT TCGACTCGAT CCCGGCGATC CGCAGCCACC TCCAGACGCT CTGCGACGTC
GGGCTGGGGT ACGTCCGGCT CGGCCAGCCG GCCACCACCC TCTCCGGGGG CGAGGCGCAG
CGCGTCAAGC TCGCGGCCGA GCTGAAGCGG CGCTCCACCG GCCGTACGGT CTACGTGCTC
GACGAGCCGA CCACGGGCCT GCACTTCGAG GACATCCGCC GGCTGCTCGG CGTGCTCCAC
CGCCTGGTGG ACGCCGGCAA CACGGTGATC GTCATCGAGC ACAACCTCGA CGTGATCAAG
ACGGCCGACT GGATCATCGA CATGGGGCCG GAGGGCGGTT CCCGGGGCGG CCGGGTGGTC
GCCGCGGGCA CGCCGGAGGA GGTCGCCCAG GTCGAGGAGA GCCACACCGG CCGCTTCCTC
CGCAAGATCC TCGGCGGCTG A
|
|---|
| Protein sequence | MADRLIVRGA REHNLKDVSL DLPRDALIVF TGLSGSGKSS LAFDTIFAEG QRRYVESLSA
YARQFLGQLD KPDVDFIEGL SPAVSIDQKS TSRNPRSTVG TITEVYDYLR LLWARIGKPH
CPSCGRPIAK QTPQQIVDRV LELPEGTRFQ VLAPVIRGRK GEYGELFREL QTKGFARARV
DGQVIRLEEP PALKKYEKHT IEVIVDRLVV KESARRRLTD SVETALRLSG GTVMLDFVDL
PEDDPNRERL YSEHLYCPYD DLSFEELEPR SFSFNSPFGA CPECTGLGTR MEVDPELVVP
DPERTLGEGA VSPWANGHTS DYFTRLLEAL GHAMGFDLDT PWHRLPKKAQ KAILYGYDEQ
VHIRYRNRYG RERSYYTTFE GVIPWVQRRH AEAESDVGRE RFEGYMRQVP CPACKGRRLK
PVSLAVTVGG KSIADVSAMS IAECAAFLSD LRLSPRDAQI AERVIKEIKA RLGFLLDVGL
DYLTLDRPAA TLAGGEAQRI RLATQIGSGL VGVLYVLDEP SIGLHQRDNQ RLLDTLLKLR
DMGNTLIVVE HDEDTIAAAD WVVDIGPGAG EHGGQIVVSG TVQDLIACEE SITGAYLSGR
RRIDIPERRR PRDKKRQLVV KGAREHNLAG IDVEFPLGVF TAVTGVSGSG KSTLVNDILY
NALAKELHGA RTVPGRHSRI TGIELVDKVV HVDQSPIGRT PRSNPATYTG VFDHVRKLFA
ATTEAKVRGY QPGRFSFNIK GGRCEACAGD GTIKIEMNFL PDVYVPCEVC HGARYNRETL
EVRYKGKTIA DVLDMPIEEA LEFFDSIPAI RSHLQTLCDV GLGYVRLGQP ATTLSGGEAQ
RVKLAAELKR RSTGRTVYVL DEPTTGLHFE DIRRLLGVLH RLVDAGNTVI VIEHNLDVIK
TADWIIDMGP EGGSRGGRVV AAGTPEEVAQ VEESHTGRFL RKILGG
|
|---|
| |