Gene Tbis_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1955 
Symbol 
ID9168449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp2264464 
End bp2266260 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content74% 
IMG OID 
Productglycoside hydrolase 15-related protein 
Protein accessionYP_003652560 
Protein GI296269928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.172599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG AGGACTACGC CCTCATCGGG GACATGCAGT CGGCCGCGCT GGTCGGGCGG 
GACGGCTCGA TCGACTGGCT CTGCCTGCCC CGGTTCGACT CCCCTGCGTG CTTCGCCCGG
CTGCTCGGCA CCGGGGACCA CGGCTTCTGG CGGCTCGCCC CGGCCGGGAT GGAGCGGGCG
TCGCGGCGCT CCTACATCCC GGACACGCTG ATCCTCGAGA CGGTGTGGGA GACCGCCGGC
GGCACGGTCA AGGTGATCGA CTTCATGCCG CCCCGGCATG AGAACCCGGA CCTGGTGCGG
ATCGTCGAGG GCGTCTCCGG CACGGTGGAG ATGACCACGG AGATCTGCAT CCGCTTCGAC
TACGGCCGGA TCGTGCCGTG GGTCCGCCGC CGCGACGGGC TGCTCCACGC CATCGGCGGC
CCGGATTCGG TCTGGATCCA CTCCCCGGTG CCCCTGGAGG GCGGCGGGTA CCGGCACTCC
GCCGCGTTCC GGGTCTCCGC CGGAGACCGG CTGCCGTTCA TCTTCACCTG GCACCCCTCC
TACCAGCCGC CGCCCGAGGC GATCGACCCC ATCGCGCAGC TCGCCGCGAC CCGGGAGCTG
TGGGAGGAGT GGGTCTCCCG GTGCACGTAC CACGGCCCGT GGCGGGACGC GGTGGTCCGC
TCGCTGATCA CGCTGAAGGC GCTGACGTAC CGCCCCACCG GCGGGATCGT CGCCGCGCCC
ACCACCTCCC TGCCCGAGCA CCTCGGCGGG GTGCGGAACT GGGACTACCG GTACTGCTGG
CTGCGGGACG CCGCGATGAC CCTCGAGGCG CTCACCAGCA CCGGGTACCT GGAGGAGGCG
GCCGCCTGGC GCGACTGGCT GATCCGGGCC GTGGCCGGCC GCCCCGAGGA CCACCAGGTC
GTGTACGGCG TGGCGGGCGA ACGGCGGCTG CCCGAGCTGA TCCTCGACTG GCTCCCCGGG
TACGAGAACT CCCGCCCGGT GCGGATCGGC AACGGCGCGG CCGGGCAGGT CCAGCTCGAC
GTCTACGGGC AGATGCTCAA CGCGCTCTTC GAGGCGCGCC GGCGCGGCCT CCCCCCGGAC
GACCACGTCT GGGCGATGAT GCGGGCGGTG CTGGGGTTCC TCGAGGTCAA CTGGGCGCAG
CCCGACGAGG GCCTGTGGGA GGTCCGCGGC CCGCGGCGGC ACTTCGTCCA CTCGAAGGTC
ATGGCGTGGG TGGCGTTCGA CCGCGCGGTC CGGGCGGTGC GGCTCGGGTG GCGCGAGGGC
CCGGCCGACC GCTGGCAGGA GCTGCGCGAC CGCATCCACG CCGAGGTCTG CGCCAAGGGC
TACGACCCGG AGCGGGCCAC GTTCACCCAG TCGTACGGCT CCCGCGAGCT CGACGCGGCG
CTGCTGCTCA TCCCGATCGT GGGGTTCCTC CCGCCCGAGG ATCCGCGGGT GGCGTCGACG
ATCGCCGCGA TCGAGCGGGA GCTGATGACC GACGGGCTGG TGCTCCGCTA CCCCATCGCC
GAGGAGAACC CGATCGACGG CCTGCCCGGG ACCGAGGGCG CGTTCCTCGC GTGCAGCTTC
TGGCTCGCCC AGGCCCGGGC GATGACCGGC CGGGTGGCCG AGGCGGTGGA GCTGTTCGAG
CTGCTGCTCT CGCTCCGCAA CGACGTGGGC CTGCTCGCCG AGGAGTACGA CCCGCGGCTC
GGCCGGCAGC TCGGCAACTT CCCGCAGGCC TTCAGCCACA TCCACCTGGT GCGGACCGCC
CTCGCCCTCG ACCGGGCCGT GCGCGCCGCC GGGGCCGCCG CCCGGACGGC CCGGTGA
 
Protein sequence
MRIEDYALIG DMQSAALVGR DGSIDWLCLP RFDSPACFAR LLGTGDHGFW RLAPAGMERA 
SRRSYIPDTL ILETVWETAG GTVKVIDFMP PRHENPDLVR IVEGVSGTVE MTTEICIRFD
YGRIVPWVRR RDGLLHAIGG PDSVWIHSPV PLEGGGYRHS AAFRVSAGDR LPFIFTWHPS
YQPPPEAIDP IAQLAATREL WEEWVSRCTY HGPWRDAVVR SLITLKALTY RPTGGIVAAP
TTSLPEHLGG VRNWDYRYCW LRDAAMTLEA LTSTGYLEEA AAWRDWLIRA VAGRPEDHQV
VYGVAGERRL PELILDWLPG YENSRPVRIG NGAAGQVQLD VYGQMLNALF EARRRGLPPD
DHVWAMMRAV LGFLEVNWAQ PDEGLWEVRG PRRHFVHSKV MAWVAFDRAV RAVRLGWREG
PADRWQELRD RIHAEVCAKG YDPERATFTQ SYGSRELDAA LLLIPIVGFL PPEDPRVAST
IAAIERELMT DGLVLRYPIA EENPIDGLPG TEGAFLACSF WLAQARAMTG RVAEAVELFE
LLLSLRNDVG LLAEEYDPRL GRQLGNFPQA FSHIHLVRTA LALDRAVRAA GAAARTAR