Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbis_1955 |
Symbol | |
ID | 9168449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobispora bispora DSM 43833 |
Kingdom | Bacteria |
Replicon accession | NC_014165 |
Strand | + |
Start bp | 2264464 |
End bp | 2266260 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | glycoside hydrolase 15-related protein |
Protein accession | YP_003652560 |
Protein GI | 296269928 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.172599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGATCG AGGACTACGC CCTCATCGGG GACATGCAGT CGGCCGCGCT GGTCGGGCGG GACGGCTCGA TCGACTGGCT CTGCCTGCCC CGGTTCGACT CCCCTGCGTG CTTCGCCCGG CTGCTCGGCA CCGGGGACCA CGGCTTCTGG CGGCTCGCCC CGGCCGGGAT GGAGCGGGCG TCGCGGCGCT CCTACATCCC GGACACGCTG ATCCTCGAGA CGGTGTGGGA GACCGCCGGC GGCACGGTCA AGGTGATCGA CTTCATGCCG CCCCGGCATG AGAACCCGGA CCTGGTGCGG ATCGTCGAGG GCGTCTCCGG CACGGTGGAG ATGACCACGG AGATCTGCAT CCGCTTCGAC TACGGCCGGA TCGTGCCGTG GGTCCGCCGC CGCGACGGGC TGCTCCACGC CATCGGCGGC CCGGATTCGG TCTGGATCCA CTCCCCGGTG CCCCTGGAGG GCGGCGGGTA CCGGCACTCC GCCGCGTTCC GGGTCTCCGC CGGAGACCGG CTGCCGTTCA TCTTCACCTG GCACCCCTCC TACCAGCCGC CGCCCGAGGC GATCGACCCC ATCGCGCAGC TCGCCGCGAC CCGGGAGCTG TGGGAGGAGT GGGTCTCCCG GTGCACGTAC CACGGCCCGT GGCGGGACGC GGTGGTCCGC TCGCTGATCA CGCTGAAGGC GCTGACGTAC CGCCCCACCG GCGGGATCGT CGCCGCGCCC ACCACCTCCC TGCCCGAGCA CCTCGGCGGG GTGCGGAACT GGGACTACCG GTACTGCTGG CTGCGGGACG CCGCGATGAC CCTCGAGGCG CTCACCAGCA CCGGGTACCT GGAGGAGGCG GCCGCCTGGC GCGACTGGCT GATCCGGGCC GTGGCCGGCC GCCCCGAGGA CCACCAGGTC GTGTACGGCG TGGCGGGCGA ACGGCGGCTG CCCGAGCTGA TCCTCGACTG GCTCCCCGGG TACGAGAACT CCCGCCCGGT GCGGATCGGC AACGGCGCGG CCGGGCAGGT CCAGCTCGAC GTCTACGGGC AGATGCTCAA CGCGCTCTTC GAGGCGCGCC GGCGCGGCCT CCCCCCGGAC GACCACGTCT GGGCGATGAT GCGGGCGGTG CTGGGGTTCC TCGAGGTCAA CTGGGCGCAG CCCGACGAGG GCCTGTGGGA GGTCCGCGGC CCGCGGCGGC ACTTCGTCCA CTCGAAGGTC ATGGCGTGGG TGGCGTTCGA CCGCGCGGTC CGGGCGGTGC GGCTCGGGTG GCGCGAGGGC CCGGCCGACC GCTGGCAGGA GCTGCGCGAC CGCATCCACG CCGAGGTCTG CGCCAAGGGC TACGACCCGG AGCGGGCCAC GTTCACCCAG TCGTACGGCT CCCGCGAGCT CGACGCGGCG CTGCTGCTCA TCCCGATCGT GGGGTTCCTC CCGCCCGAGG ATCCGCGGGT GGCGTCGACG ATCGCCGCGA TCGAGCGGGA GCTGATGACC GACGGGCTGG TGCTCCGCTA CCCCATCGCC GAGGAGAACC CGATCGACGG CCTGCCCGGG ACCGAGGGCG CGTTCCTCGC GTGCAGCTTC TGGCTCGCCC AGGCCCGGGC GATGACCGGC CGGGTGGCCG AGGCGGTGGA GCTGTTCGAG CTGCTGCTCT CGCTCCGCAA CGACGTGGGC CTGCTCGCCG AGGAGTACGA CCCGCGGCTC GGCCGGCAGC TCGGCAACTT CCCGCAGGCC TTCAGCCACA TCCACCTGGT GCGGACCGCC CTCGCCCTCG ACCGGGCCGT GCGCGCCGCC GGGGCCGCCG CCCGGACGGC CCGGTGA
|
Protein sequence | MRIEDYALIG DMQSAALVGR DGSIDWLCLP RFDSPACFAR LLGTGDHGFW RLAPAGMERA SRRSYIPDTL ILETVWETAG GTVKVIDFMP PRHENPDLVR IVEGVSGTVE MTTEICIRFD YGRIVPWVRR RDGLLHAIGG PDSVWIHSPV PLEGGGYRHS AAFRVSAGDR LPFIFTWHPS YQPPPEAIDP IAQLAATREL WEEWVSRCTY HGPWRDAVVR SLITLKALTY RPTGGIVAAP TTSLPEHLGG VRNWDYRYCW LRDAAMTLEA LTSTGYLEEA AAWRDWLIRA VAGRPEDHQV VYGVAGERRL PELILDWLPG YENSRPVRIG NGAAGQVQLD VYGQMLNALF EARRRGLPPD DHVWAMMRAV LGFLEVNWAQ PDEGLWEVRG PRRHFVHSKV MAWVAFDRAV RAVRLGWREG PADRWQELRD RIHAEVCAKG YDPERATFTQ SYGSRELDAA LLLIPIVGFL PPEDPRVAST IAAIERELMT DGLVLRYPIA EENPIDGLPG TEGAFLACSF WLAQARAMTG RVAEAVELFE LLLSLRNDVG LLAEEYDPRL GRQLGNFPQA FSHIHLVRTA LALDRAVRAA GAAARTAR
|
| |