| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_1954 |
|---|
| Symbol | |
|---|
| ID | 9168448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | + |
|---|
| Start bp | 2262917 |
|---|
| End bp | 2264422 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | amino acid/peptide transporter |
|---|
| Protein accession | YP_003652559 |
|---|
| Protein GI | 296269927 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.457543 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACCG TCTCGCCGGC CCGCGATCGG GGCCCGGCCT TCTCCGGCCA TCCACGCGGC
CTCGCCACGC TCTGCGGCAC CGAGATGTGG GAGCGCTTCA GCTACTACGG CATGCGCTCG
ATCCTGGTCC TCTTCCTCGT GGCGCCCCCG GTGGCCGGCG GAATGGGGCT CTCCGAGACG
ACCGCGGTCG GGGTGTACGG CGTCTACATC GCCTCGGTCT ACCTGCTCGC GCTCGCCGGC
GGCTGGATCG GGGACCGGCT GCTCGGCACC CGGCGGACGG TCCTGCTCGG CGCGTGCGTG
ATCATGTCCG GCCACCTCGC CATGGCGGTC CCCGTGGCCG GGCCGTTCAC CTGGCTGGGG
CTCGCCCTCA TCGCCGTGGG AAGCGGGCTG CTCAAACCGA ACATCGCCGC GCTCGTCGGC
CACCTCTACC GGGACGAGGA CGAGCCCCGG CGGGAGGCCG GGTACACGCT GTTCTTCCTC
GGCATCAACG TCGGCGCCTT CCTCGGCATC ATCGTCGTGC CCTGGCTCCA GCGCGGGGAC
CGGTGGCACC TGGCGTTCGG CGCCGCCGCG GCGGGCATGG CGATCGGGCT CGCCCAGTAC
GTGCTCGGCG GCCGGCGCCT CGCCGGCGCG GGCGAGCGCC CCGGGCACCG GCTCACCCCT
GCGGAGCGGC GCCGCTTCAC GGCCGTGGCG CTCACCGGGA CGGCCGTCAC CGCCGCGGCC
CTCGGCCTGT GGGCGCTGAG CGGGACGTTC ACCATCGAGC GGTTCACGCT CGCGCTCGCC
GTGGTGACCG CGCTCGTGCC GCTCGCCTAC TTCGCCTTCC TGCTCTTCGG CTCCCATGAG
ATCACCCCGC CGGAGCGCAC CGGGCTGTAC GCGTACCTCT GGCTCTTCCT CGCCGCCGCG
GTCTTCTGGA TGATCTACGA CCAGGCCGGC AGCGCCCTGC TGCTCTTCGC CAAGGAGCAC
ACCCGGCTGC ACATCCTCGG GTTCGACGTG CCGCCGAGCT GGGTGGCGAA CGTCAACTCG
CTCACGATCA TCCTGCTCGC GCCGGCGTTC GCGCGGTTCT TCGTCGCCGC GGGGGACCGG
ATCGGCATCC CGGCGAAGTT CGCGGCCGCG CTCCTGCTCA TCGGGCTGAG CTTCGTGGTG
ATGGCGGTCG CCGCCGGGTT CGCCGCCGGC GGGACGAAGG TCTCGGTCGC CTGGCTGCTC
ACGGTGTACT TCATCCAGAC CATCGGCGAG ATCTTCCTCA CTCCGGTCGG GCTCTCCGTG
ACCCGGCGGC TCGCCCCCGC CGCGTTCCAG AACCAGATGA TGGGCGTGTG GTACCTGGCG
ATCGCGCTCG GCGACGCGGC CGGCGGCCAG GTCTACCGGC TCACCACCGT GGTGCCCATG
CCCGTCTACT ACCTGGTGCT CGCCCTCGCC GCGATCGCGG CCGGCCTGCT CATCGCGCTC
GGCTCGGGCC GGCTCCGGGC GCTCATGGGC GACCCGGCCG GAACGGAGCC CGCCCGCGCG
GGGTGA
|
|---|
| Protein sequence | MQTVSPARDR GPAFSGHPRG LATLCGTEMW ERFSYYGMRS ILVLFLVAPP VAGGMGLSET
TAVGVYGVYI ASVYLLALAG GWIGDRLLGT RRTVLLGACV IMSGHLAMAV PVAGPFTWLG
LALIAVGSGL LKPNIAALVG HLYRDEDEPR REAGYTLFFL GINVGAFLGI IVVPWLQRGD
RWHLAFGAAA AGMAIGLAQY VLGGRRLAGA GERPGHRLTP AERRRFTAVA LTGTAVTAAA
LGLWALSGTF TIERFTLALA VVTALVPLAY FAFLLFGSHE ITPPERTGLY AYLWLFLAAA
VFWMIYDQAG SALLLFAKEH TRLHILGFDV PPSWVANVNS LTIILLAPAF ARFFVAAGDR
IGIPAKFAAA LLLIGLSFVV MAVAAGFAAG GTKVSVAWLL TVYFIQTIGE IFLTPVGLSV
TRRLAPAAFQ NQMMGVWYLA IALGDAAGGQ VYRLTTVVPM PVYYLVLALA AIAAGLLIAL
GSGRLRALMG DPAGTEPARA G
|
|---|
| |