Gene Tbis_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1744 
Symbol 
ID9168238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp2017650 
End bp2018858 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content75% 
IMG OID 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_003652350 
Protein GI296269718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0300334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGCC GGCTGCCGCT GGAAGGGGTG CTGGTCGCCG ACTTCAGCCG GGTGCTCGCC 
GGCCCGCTCG CCACGATGAC CCTGGCCGAC CTCGGCGCCA CCGTGATCAA GGTGGAGCGG
CCGGGCTCCG GGGACGACAC CCGGGCCTGG GGCCCGCCGT GGACCACCCA CGCCAGCTCG
TACTTCGAGT GCGTGAACCG CTCCAAGCGC AGCGTCGTGC TCGACCTGGC CGACCCCGAT
GACCGGGCCA AGGCGCAGGA GCTCGCCAGA CGGGCCGACG TGGTGGTGGA GAACTTCCGC
CCCGGTGTGC TCGGCAAGTA CGGCCTCGAC TACGAGTCGG TCCGGGCCGC CAACCCCGGC
GTGATCTACT GCTCGATCAC CGGGTTCGGC CGGGAGGGCG GCGCCCACCT GACCGGGTAC
GACTTCGTCG TGCAGGCCGT GGGCGGGCTG ATGCACATCA CCGGCCACCC GGACGGGGAG
CCGACCAAGG TAGGCGTGGC GCTCGTGGAC GTGCTCACCG GCAAGGACGC CGTCATCGGG
ATCCTCGCGG CGCTGCGCCA CCGCGAGCGC ACCGGCGAGG GCCAGCGCGT CGAGGTCGAC
CTCTTCTCCA GCTGCCTGGG CGCCCTGGTC AACCAGGCCG CCGGGTACCT GGCCACCGGG
CGCAGCCCCG GCCGGCTGGG CAACCAGCAC CCGAGCATCG CGCCGTACCA GACGCTGCGC
TGCGCGGACG GGCTGCTCGC GGTCGCCGTC GGGAACGACG CCCAGTTCCG GGTGTTCACC
CGGATCCTGG GACGGCCCGA GCTGGCCGAC GACCCGCGGT TCGCCACCAA CCCGGCCCGG
GTGGAGCACC GCGACGAGCT CGCCGCCGCC CTGGAGGCCG CGCTCGCCGC CCGCCGGGTG
GCCGAGTGGG AGGCCGACCT GCGCGCCGCC GGGATCCCGT GCGGCCAAGT GAACGACATC
GGCCAGGCGA TCGCCTTCGC CACCGAGCTG GGCCTGGAGC CGGTGCACGA CCTCGGTGAG
GAGTACCTGC CGCAGGTGCG CAACCCGGTC CGCCTGTCGG CCACCCCGCC GGCCGCGCCC
GCCCCGCCGC CACGGCTGGG GGAGCACACC GACGAGGTGC TCGCCTGGCT GTCCACGCCC
GATGGCCCGC TTCCGCCCCC GCTCCGCGCC GCCGCCGGCG GCGCCGCTCG CCAGGAGAAC
GACGAATGA
 
Protein sequence
MSRRLPLEGV LVADFSRVLA GPLATMTLAD LGATVIKVER PGSGDDTRAW GPPWTTHASS 
YFECVNRSKR SVVLDLADPD DRAKAQELAR RADVVVENFR PGVLGKYGLD YESVRAANPG
VIYCSITGFG REGGAHLTGY DFVVQAVGGL MHITGHPDGE PTKVGVALVD VLTGKDAVIG
ILAALRHRER TGEGQRVEVD LFSSCLGALV NQAAGYLATG RSPGRLGNQH PSIAPYQTLR
CADGLLAVAV GNDAQFRVFT RILGRPELAD DPRFATNPAR VEHRDELAAA LEAALAARRV
AEWEADLRAA GIPCGQVNDI GQAIAFATEL GLEPVHDLGE EYLPQVRNPV RLSATPPAAP
APPPRLGEHT DEVLAWLSTP DGPLPPPLRA AAGGAARQEN DE