Gene Tbis_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1679 
Symbol 
ID9168173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1943747 
End bp1945429 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content75% 
IMG OID 
Producturocanate hydratase 
Protein accessionYP_003652285 
Protein GI296269653 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.582007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.204575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGGAC GCAGGACGAT CCGGGCGCCG AGAGGCCGCC GGCTGACCGC GCGCGGGTGG 
CCGCAGGAGG CCGCGCTGCG CATGCTCATG AACAACCTCG ACCCCGAGGT GGCCGAGCAC
CCGGAGGAGC TGATCGTCTA CGGCGGCACC GGCAAGGCCG CCCGGGACTG GCGCTCGTTC
GACGCCATCG TCCGCGCCCT CACCACGCTC GCCGACGACG AGACCCTGCT CGTCCAGTCC
GGGCGGCCGG TCGGCGTGCT CACCACCCAC GAGTGGGCGC CCCGGGTGCT GATCGCCAAC
GCCAACCTCG TGGGGGAGTG GGCGACCTGG CCCGAGTTCC GGCGGCTGGA ACGGCTCGGC
CTCACCATGT ACGGGCAGAT GACCGCCGGG TCGTGGATCT ACATCGGCAC CCAGGGCATC
CTCCAGGGCA CGTACGAGAC CTTCGCCGCG GTCGCGGCCG AACGGTTCGG CGGCACCCTG
GCCGGCACGG TCACCCTCAC CGGCGGGCTC GGCGGCATGG GCGGCGCCCA GCCGCTCGCG
GTCACCCTGA ACGGCGGCGT CGCGATCTGC GTGGACTGCG ACCCCCGGAG CATCGAGCGC
CGGATCAGGC ACGGGTACCT CGACCTCCGG GCGGAGAGCC TCGACGAGGC GCTCCGGCTC
GCCGAGCAGG CCCGCCGCGC CCGCCGCCCG CTCTCGATCG GGGTCGAGGC GAACGCGGCC
CGGGCCGTCC CCGAGGCGCT CGCCAAGGGC GCGGAGGTCG ACATCGTCAC CGACCAGACC
AGCGCGCACG ACCCGCTGAC CTACCTGCCG CTGGGCGTCG CCTTCGCGGA CATGGCGGCC
AAGGCGCGCG AGGACCCGGA GGGGTTCACC CGCCGGGCGC GGGAGTCGAT GGCCCGGCAC
GTCGAGGGCA TGCTCGGCTT CCTGGACGCG GGGGCGGTGG TCTTCGACTA CGGCAACTCG
ATCCGCGGCG AGGCGCGGCT CGGCGGGTGC GCCCGCGCCT TCGACATCCC CGGGTTCGTG
CCCGCCTACA TCCGCCCCCT GTTCTGCGAG GGCAAGGGCC CGTTCCGGTG GGTCGCCCTC
TCCGGTGACC CGGCGGACAT CGCCCGGACC GACCGGGCGA TCCTCGAGCT CTTCCCGGAC
AACGAGCCGC TCGCCCGGTG GATCCGGGCG GCGGGGGAGC GGGTCCGCTT CCAGGGTCTG
CCAGCGCGCA TCTGCTGGCT CGGGTACGGC GAGCGCGACC GGGCCGGGGA GCGGTTCAAC
GACATGGTCG CCTCGGGCGA GCTCTCCGCG CCCATCGTGA TCGGCCGGGA CCACCTCGAC
TGCGGTTCCG TGGCCTCGCC GTACCGGGAG ACCGAGGGGA TGGCCGACGG CTCGGACGCG
ATCGCCGACT GGCCGCTCCT CAACGCCATG GTCAACGTCG CCTCGGGCGC CTCCTGGGTC
GCCGTCCACC ACGGCGGGGG CGTCGGGATC GGCCGCTCGC TCCACGCCGG GCAGGTGGTC
GTGGCGGACG GCACGGCGCT CGCCGGCGAG AAGGTGCGCC GGGTGCTCAC CAACGACCCG
GCGACCGGTG TGATCCGGCA CGCCGACGCC GGCTACGAGC GCGCGGCCCG GGTCGCCCGG
GAGCGGGGCG TGCGGATCCC CATGGACCCC GGCGCCGGTG GACCGCGGCC CGGCGCGTCC
TGA
 
Protein sequence
MDGRRTIRAP RGRRLTARGW PQEAALRMLM NNLDPEVAEH PEELIVYGGT GKAARDWRSF 
DAIVRALTTL ADDETLLVQS GRPVGVLTTH EWAPRVLIAN ANLVGEWATW PEFRRLERLG
LTMYGQMTAG SWIYIGTQGI LQGTYETFAA VAAERFGGTL AGTVTLTGGL GGMGGAQPLA
VTLNGGVAIC VDCDPRSIER RIRHGYLDLR AESLDEALRL AEQARRARRP LSIGVEANAA
RAVPEALAKG AEVDIVTDQT SAHDPLTYLP LGVAFADMAA KAREDPEGFT RRARESMARH
VEGMLGFLDA GAVVFDYGNS IRGEARLGGC ARAFDIPGFV PAYIRPLFCE GKGPFRWVAL
SGDPADIART DRAILELFPD NEPLARWIRA AGERVRFQGL PARICWLGYG ERDRAGERFN
DMVASGELSA PIVIGRDHLD CGSVASPYRE TEGMADGSDA IADWPLLNAM VNVASGASWV
AVHHGGGVGI GRSLHAGQVV VADGTALAGE KVRRVLTNDP ATGVIRHADA GYERAARVAR
ERGVRIPMDP GAGGPRPGAS