Gene Tbis_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1629 
Symbol 
ID9168123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1886474 
End bp1888720 
Gene Length2247 bp 
Protein Length748 aa 
Translation table11 
GC content71% 
IMG OID 
Productprotein-export membrane protein SecD 
Protein accessionYP_003652236 
Protein GI296269604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.683752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.475056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTG CGCCTCTGTG GCGCGCGCTG GTGGCACTCG CCGTCATCGC GGCATCACTC 
GCCTTCGCCT TGACCATGCC CCCGCGCCTC GGCCTCGACC TGCGCGGCGG CACCCAGCTC
GTCTTCGAGG CGAAGGATTC CCCGAAGGTC AAGGCCGACG CCGAGGCCAC CGACCGCGCC
CTGGACATCC TGCGCCGCCG GGCGGACGCG CTCGGCGTCG TCGAACCCAC CCTGGTCCGC
TCCGGTGAGC GGCGGATCAT CGTCGAGCTG CCCGGCGTGC TCGACCCGCG GAAGGCCGCC
AGCGTCATCG GCAAGACCGC GCAGCTCACC TTCCACCCGG TGCTCGGCGC CGCCGACGAG
AACGACAAGG ACGCGCTGGC CGACGAGAGC GGTCAGAAGC TCCGCCTCGG CCCCGCCGCG
ATCAGCGGCG ACGCGGTGAC CGACGCGGCG GCGCGCACCA ACCCCCAGAT GGGGCCCGGG
TGGTTCGTCA CCATCGACTT CAAGGAGTCC GGCCCCTGGA AGAAGCTGAC CGGTGAGGCG
GCCTGCAACC CGGTCGGCGA CCCCAAGCGC CGGATCGCGA TCGTCCTCGA CAACGAGATC
ATCTCGTCCC CCCAGGTGGA CGAGTCCGTG GGCTGCAACG TCGGCATCAC CGGCGGCTCC
ACGCAGATCA CCGGCTCGTT CACCATGGAG GAGGCGCAGA ACCTCGCCGT CCTGATCAAG
GGCGGTTCGC TGCCGGTGCC GCTCGAGCTG GTGGAGCAGC GGACGGTCGG CCCGACCCTC
GGCGCCGAGG CGATCGAGGC GAGCGCGAAG GCCGCCGTCG TCGGCGTGAT CCTCACCACG
CTCTTCATCG TGGTCATCTA CCGGGTCGTC GGCCTGCTCG CCGCGATCGC GCTCGCCTCC
TACGCCCTGA TCTCCTACGC CGGCCTGGTG GCGATCGGCG CCACGCTCAC CCTCCCCGGC
CTCGCCGGTT TCGTGCTCGC GATCGGCATG GCGGTCGACG CCAACGTGCT CGTCTTCGAG
CGGGCGCGTG AGGAGTACCG CGCCTCACCC GAGCGCGGTC TGAAGTGGGC GAGCCAGCTC
GGGTTCAAGA ACGCGTGGAG CGCGATCGCC GACTCCAACA TCACCACCCT GCTCGCGGCC
GCTCTGCTGT TCTGGCTGGC GTCCGGTCCG GTCAAGGGCT TCGGCGTGAC CCTGTCCATC
GGTGTGCTCG CGTCGCTGAT CTCGGCGATG CTGATCACCC GGGTCCTGGT CGACCTGATC
ATCCGCAAGG TGCCGGTGCG CGCCTCGGGC CTCGGCTCGA TCGGCCGGGT GCGGACGTGG
CTGACCACGC GCAACCCCAA CCTCATGGCG CGCCGGCGGA TCTGGCTGGG GATCGCCGCC
GTCCTGCTGA TCACCGCGAT CGCGGGGCCG GTGGCCCGCG GCTTCAACTT CGGCGTGGAG
TTCACCGGCG GCCGGATCAT GGAGTTCGCC ACCCAGCAGC CGGTCGACGC CGAGGCGGCG
CGGCAGGTGG TGTCGGACGC CGGGTTCCCG TCGGCCGTGG TCCAGCGCTC GCAGGACGCG
ATCTCCGTGC GCACCGGGCA GATCTCCGCG GACGACGTGG CCCGCATCGA GGAGGCCCTC
GACAAGAGGT TCGGCGACGT CACCAAGGAG CGCGACGAGC TGATCGGGCC GAGCCTCGGT
GACGAGCTCC GGCGCAACGC GATCATCGCG CTCTCGCTCG CGCTCGCCGC GCAGCTCGCC
TACCTCGCGT ACCGGTTCCG GTGGACGTTC GGCACCGCGG CGGTGCTCGC GCTCTTCCTG
GACTGCATGG TCGTGATCGG CCTGTTCGCC TGGCTCGGCA AGCCGATCGA CGGTGTCTTC
CTCGCGGCCA TGCTCACGAT CGTCGGTTAC TCGGTGAACG ACAAGGTCGT GCTGTTCGAC
CGCGTCCGGG AGGAGTGGCC GCTCCGGCGC AAGGACGTCT TCGACGGGGT GGTGAACAGC
GCCATCCTGC AGACCGTCCC GCGGACGGTT AACACCGGTC TCGGTGCGCT GTTCATCCTC
GCCGCGCTCG CCGTCTTCGG CGGCGACTCG CTGCAGGACT TCGCGATCGC CCTGCTCGTC
GGAATCACCG TGGGCACGCT CTCCTCGTCG TTCGTGGCCG CTCCGGCCGC GATCGAGCTC
GAAAAGATCA ACAAGCAGCC CCCGCCGGTG CCGCACCGCC CGAAGCGGAC GTCCCGGACC
CGCGAGGGCA CGGGCGCGGT GCTCTGA
 
Protein sequence
MSRAPLWRAL VALAVIAASL AFALTMPPRL GLDLRGGTQL VFEAKDSPKV KADAEATDRA 
LDILRRRADA LGVVEPTLVR SGERRIIVEL PGVLDPRKAA SVIGKTAQLT FHPVLGAADE
NDKDALADES GQKLRLGPAA ISGDAVTDAA ARTNPQMGPG WFVTIDFKES GPWKKLTGEA
ACNPVGDPKR RIAIVLDNEI ISSPQVDESV GCNVGITGGS TQITGSFTME EAQNLAVLIK
GGSLPVPLEL VEQRTVGPTL GAEAIEASAK AAVVGVILTT LFIVVIYRVV GLLAAIALAS
YALISYAGLV AIGATLTLPG LAGFVLAIGM AVDANVLVFE RAREEYRASP ERGLKWASQL
GFKNAWSAIA DSNITTLLAA ALLFWLASGP VKGFGVTLSI GVLASLISAM LITRVLVDLI
IRKVPVRASG LGSIGRVRTW LTTRNPNLMA RRRIWLGIAA VLLITAIAGP VARGFNFGVE
FTGGRIMEFA TQQPVDAEAA RQVVSDAGFP SAVVQRSQDA ISVRTGQISA DDVARIEEAL
DKRFGDVTKE RDELIGPSLG DELRRNAIIA LSLALAAQLA YLAYRFRWTF GTAAVLALFL
DCMVVIGLFA WLGKPIDGVF LAAMLTIVGY SVNDKVVLFD RVREEWPLRR KDVFDGVVNS
AILQTVPRTV NTGLGALFIL AALAVFGGDS LQDFAIALLV GITVGTLSSS FVAAPAAIEL
EKINKQPPPV PHRPKRTSRT REGTGAVL