Gene Tbis_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1587 
Symbol 
ID9168081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1833764 
End bp1834894 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content74% 
IMG OID 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_003652194 
Protein GI296269562 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.167194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGTC CGACCCCGCC GTCGACCGGC GCCTCGGTGC GCCTCAACCG GGTGACCAAG 
CGGTACGGCG GCCTGCGCGC GCTCGACGAC GTGACCCTGC ACATCGAGGC GGGCGAGTTC
ATGACGTTGC TCGGTGCCAG CGGCTCGGGC AAGTCGACGC TGCTCAACAT CATCGCCGGC
TTCACCAAGG CCGACTCCGG GACCGTGGAG GTCGGCGGCC GGGACCTCAC CGGGGTGCCG
CCGCACAAGC GCGGGCTCGG CATGGTGTTC CAGCAGTACG CCCTCTTCCC GCACATGACC
GTCTTCGAGA ACGTGGCCTT CCCGCTGCGC CGCCGGCGGG TGCCCAAGGA CGAGCTGGTC
AAGCGGGTGC GGGAGGCGCT CGACATCGTC GAGCTCGGCC ACCTGCGGTC GCGGATGCCC
GCGCAGCTCT CCGGCGGGCA GCAGCAGCGG GTCGCGTTCG CCCGGGCGAT CGTGTTCCAC
CCGCAGGTGC TCCTCATGGA CGAGCCGCTC GCCGCGCTCG ACAAGCGCCT CCGGGAGCAG
CTCCAGATCG AGATCAAGCG GCTGCACCGC GAGCTGGGGA TCACCTTCGT GTTCGTCACC
CACGACCAGC AGGAGGCGCT GGCCATGTCC GACCGGATCG CGCTGCTGCG CGACGGGCGG
ATCGTCCAGG TCGGCACCCC CGACGAGCTC TACGAACGGC CGGCCGAGCT GTACGCCGCC
GAGTTCCTCG GCGAGTCGAA CATCTTCCGC GGCACCGTGC GCGGCGGCGT CTTCACCGAC
GGCGCCTCCG GGGCGGGGCT CAAGGTGGCG GGCGCCCCCG CCGACGGGCC CGCGGCGATC
GTGCTCCGCC CGGAGAAGGT GCGGATCCTC CTGCCGCCGG ACGAGGTGCC GCCGGGCCAC
AACGCGCTCA GCGGCGTGGT GCGCGAGCTG ATCTATCTCG GCGGCGAGCG GCGCGTGGAG
GTCGGGCTCG CCGACGGCCG CCGGGTGATC GCCCGGCTCC GCAGCGACGA CCCGCACGGC
CACGTGCCCC CGGGCACCTC GGTCATCGCC TGCTGGCGCC CGGAGGACGC CCTCGTCCTC
CGCAACGGCT CCGCGGCGGC GGCCGCGCCC GACCCGCAGC CGGTCGGCTG A
 
Protein sequence
MTSPTPPSTG ASVRLNRVTK RYGGLRALDD VTLHIEAGEF MTLLGASGSG KSTLLNIIAG 
FTKADSGTVE VGGRDLTGVP PHKRGLGMVF QQYALFPHMT VFENVAFPLR RRRVPKDELV
KRVREALDIV ELGHLRSRMP AQLSGGQQQR VAFARAIVFH PQVLLMDEPL AALDKRLREQ
LQIEIKRLHR ELGITFVFVT HDQQEALAMS DRIALLRDGR IVQVGTPDEL YERPAELYAA
EFLGESNIFR GTVRGGVFTD GASGAGLKVA GAPADGPAAI VLRPEKVRIL LPPDEVPPGH
NALSGVVREL IYLGGERRVE VGLADGRRVI ARLRSDDPHG HVPPGTSVIA CWRPEDALVL
RNGSAAAAAP DPQPVG