Gene Tbis_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1569 
Symbol 
ID9168063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1805439 
End bp1806098 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content74% 
IMG OID 
ProductECF subfamily RNA polymerase sigma-24 
Protein accessionYP_003652177 
Protein GI296269545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.738543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAA AGACCCCCGT CATCGCCCGG CCATCGCCCG AGGAGCGCCT GCACCCGCCG 
GAGCCGGCCG TGGACGTCGG CCCGGAGCCG CCCCTGGAAC CGAGCCCGGA GCCGGCCCCG
GCGCCGACCG CGCAGGCCGT CGAGCCGGAG GGCGGCGCGC GTCCGGTGGA CATGAGCGAC
CGGGACGCGG CCCTGGCCGA CCTCTTCGCC CGGCACTACA CGCCGACGCT CCGCCTCGCC
GTGCTGCTCG GCGCGGACGA CGCCGAGGAC GTGGTCGCCG AGGCGTTCTG GCAGCTCTAC
CGGCGCTGGC ACCGCCTGCG CAACGTGGAC GCCGCGCTCG CCTACCTGCG CGGGACCGTG
GTGAACCTGA TCCGGATGCG GCTCCGCCAC CTCCAGGTCG CCCGCAAGCA CACTCAGGAG
ATGGGGCACG AGGTCATCTC GGCGGAGACC GAGGCGATCC TCCGCGACGA CCAGCGGGAG
CTGGTGGCCG CGCTGAAGCG GCTGCCCGCC CGCCAGCGGG AGGCCCTGGT GCTGCGCTAT
TGGCTGGGCC TGCGGGAGCA TGAGATCGCC GCCGCCATGG GCATCTCCTG TGGCGCGGTC
AAGTCGCACA CGGCCCGGGG CATGGCGGCG CTCACCCGGG CCATGGAAGG ACGATCATGA
 
Protein sequence
MKRKTPVIAR PSPEERLHPP EPAVDVGPEP PLEPSPEPAP APTAQAVEPE GGARPVDMSD 
RDAALADLFA RHYTPTLRLA VLLGADDAED VVAEAFWQLY RRWHRLRNVD AALAYLRGTV
VNLIRMRLRH LQVARKHTQE MGHEVISAET EAILRDDQRE LVAALKRLPA RQREALVLRY
WLGLREHEIA AAMGISCGAV KSHTARGMAA LTRAMEGRS