Gene Tbis_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1498 
Symbol 
ID9167991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1702023 
End bp1703468 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content72% 
IMG OID 
ProductEmrB/QacA subfamily drug resistance transporter 
Protein accessionYP_003652108 
Protein GI296269476 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.270463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGA CCGCCACCTC TGCGCAGGCC GGGGTACGCC CGTACCGATG GCGGTGGATC 
GCCCTGTTCG TGATCCTCGC CGCCGAGGTG ATGGACCTCC TGGACGGCCT CGTCACCACG
ATCGCCGCCC CCACCATCCG GCGGGACCTG GGCGGCTCGG AGAGCCTCGT GCAGTGGCTC
GGCGCCGGCT ACACCCTCGC CATGGCCGTC GGCCTGATCA CCGGCGGGCG CCTCGGCGAC
CTGTACGGCA AGAAGCGCAT GTTCGTGATC GGCGCCTCCG GCTTCACCCT CGCCTCACTG
TTGTGCGGGG TCGCGGTCAG CCCCGAGATA CTGATCGCCA GCCGCGTGCT GCAGGGCCTG
TTCGGCTCGG TGATGATCCC CCAGGGCCTG GGGCTGATCA AGGAAATGTT CCCACCCTAC
GAAGTGGGCC GGGCGTTCGG CATGTTCGGG CCCGTCCTGG CGATCTCGTC CGCGGGCGGT
CCCGTGCTGG CCGGCTGGCT GGTGGACGCC GACTTCTTCG GCACCGGGTG GCGCATGATC
TTCCTGATCA ACCTGCCGCT CGGCCTCACC GCCGTGCTCG CCGCGCTGCG CTACCTGCCG
GAGTACCGCT CCCCCGCCGC CACCCGCCTC GACCTGCCGG GTGTCGGGCT CGTCTCGCTC
GCCTCGTTCC TGCTCGTCTT CCCGCTCATC CAGGGCCGCG AGCTGGGCTG GCCCGCCTGG
ACGTTCGTGT CGATGGCCGC CTCGATCGCG GTGTTCGCCC TCTTCGGCCG GTACGAGGCC
CACCGCACCG CCTCAGGCCG CGACCCGCTC GTCACGCCCA GCCTGTTCCG CAAGCGCGCC
TTCACCGGCG GCCTGGTGGC CGGGCTCGCG TTCTTCTCCG GCTTGATCGG CTTCGGCCTC
GTCTTCACCC TCTACGCGCA GCTCGGGCTC GGCTTCGGCC CGCTCAAGGC CGGTCTCGCC
GCGCTGCCGC AGGCGCTCGG CGGCGTCGTC GGCTTCGGCC TGGCCATGTC GGGGCTGCAA
GAGAAGCTCG GCCGCGCCCT GCTGCAGATC GGCACGCTCG TCATGGCGGC CGGCGCGGCC
GTCCTGGCCC TCACCGTTCA CCTGACCGGC ACGGACGTCT CCACCCTGCG GTTCGCCCCC
GGCCTCGCGC TCGCCGGCAT CGGCATGGGG CTCGTCATGG CGCCGTTCTT CGACATCGTG
CTCGCCGGTG TCGAGCCGCA CGAGTCCGGC TCCGCCTCCG GCACGCTGAC CGCCGTCCAG
CAGCTCGGCG GCGCGTTCGG CACCGCGGTG CTCGGCACGC TCTTCTTCCA CCTCCTCGCC
GACCGGTGGA GCTTCGGCTC GGCCATGCAG CTCACGGCGT GGGTCGAGGT GGGGCTGCTG
GCGCTCACGT TCGGGCTGTC GTACCTGCTG CCCCGCCACG CCCGGCCGCA GGAGCCGGGC
GCGTGA
 
Protein sequence
MTVTATSAQA GVRPYRWRWI ALFVILAAEV MDLLDGLVTT IAAPTIRRDL GGSESLVQWL 
GAGYTLAMAV GLITGGRLGD LYGKKRMFVI GASGFTLASL LCGVAVSPEI LIASRVLQGL
FGSVMIPQGL GLIKEMFPPY EVGRAFGMFG PVLAISSAGG PVLAGWLVDA DFFGTGWRMI
FLINLPLGLT AVLAALRYLP EYRSPAATRL DLPGVGLVSL ASFLLVFPLI QGRELGWPAW
TFVSMAASIA VFALFGRYEA HRTASGRDPL VTPSLFRKRA FTGGLVAGLA FFSGLIGFGL
VFTLYAQLGL GFGPLKAGLA ALPQALGGVV GFGLAMSGLQ EKLGRALLQI GTLVMAAGAA
VLALTVHLTG TDVSTLRFAP GLALAGIGMG LVMAPFFDIV LAGVEPHESG SASGTLTAVQ
QLGGAFGTAV LGTLFFHLLA DRWSFGSAMQ LTAWVEVGLL ALTFGLSYLL PRHARPQEPG
A