Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbis_1403 |
Symbol | |
ID | 9167895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobispora bispora DSM 43833 |
Kingdom | Bacteria |
Replicon accession | NC_014165 |
Strand | + |
Start bp | 1584305 |
End bp | 1585672 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanylligase |
Protein accession | YP_003652014 |
Protein GI | 296269382 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.0784778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCCGT TGCCGCTGGC GCGGGTGGCC GAGATAACCT CGGGCGCCCT GAACGGCCTG GCCGACCCCG AGGCCGTGGT CCGAGGTCCG GTTGTGATCG ACTCGCGGGC CGTGGAGCCG GGCTCGCTGT TCGCGGCCAT CAAGGGGTCG CGGGCCGACG GCCACGACTT CGCCCAGGAG GCCTGCGCGG CCGGGGCGGT GGCCGTGCTC GCCTCCCGGC CCGTGGACGC ACCCGCCGTG ATCGTGAGGG ACGTGGTCGC CGCCCTCGCC GACCTGGCGG CCGCCGTGGT GGCCGAGCTG CCGTCGGTGA CCGTGGTCGG CGTGACCGGA TCCCAGGGGA AGACGACGAC CAAGGACCTG CTCGCCGGGC TGACCGAGCG GATCGGCCCG ACGGTCGCGC CGGTCGGCTC CCACAACAAC GAGATCGGCC ACCCGCTCAC CGTGCTGAAG GCCGATGAGC GCACCCGGTT CCTCGTCCTG GAGCTGAGCG CGCGGAACGT CGGGCACATC GCCTACCTCA CCCGGATCGC CCCGCCCCGG ATCGGCGTCG TGCTCAACGT GGGCGCGGCC CACATCGGCG TCTTCGGCGG CCGGGAGGCG ATCGCCAAGG CCAAGGGCGA GCTGGTCGAG GCGCTGCCCG AGGACGGGGT GGCCGTGCTC AACGCGGACG ACCCGTACGT CCGGGAGATG GCCGGCCGGA CCCGCGCCAG GGTGACCTGG TTCGGGCGCT CGGCCGAGGC GCGGATCCGG GCCGAGAACG AGACGCTCGA CGAGCGGGGC CGCGCCTCGT TCACCCTGTG CACGCCGTCC GGATCGGCCC CGGTACGGCT CCGCCTGCAC GGCGCGCACA TGGTGCCCGA CGCGCTCGCC GCGGCCGCGG TCGCGTACGA GCTGGGGCTG CCGGTCGTGG CGATCGCCGA GGAGCTCTCC CGGGCCGAGC CGCGCAGCCG CTGGCGCATG GAGGTGACCG ACCGGGCCGA CGGGGTCACC GTGATCAATG ACGCCTACAA CGCGAGCCCC GACTCGGTGC GGGCCGCCTT CGCCGCCCTG CGGGCCATGG GGGACGGCCG GCGGCGGTTC GCCGTGGTCG CGGCCATGCG GGAGCTCGGC GAGGCCGGTG CGGAGCTGAA CGAGGAGTTC GGCCGGATCG CCGCCGGGTC GGGATTGGAG GCCCTGATCG TGGTCGGTGA CGACGCCGGG CCGATCCTCG CCGGCGCGCC CGGCGCCATC CACGTCCCGG ACACCGACGC GGCCGCCCGG GAGCTCGCCT CCCGGCTAGC CCCGGGCGAC GTGGTGCTGG TGAAGGGGCC GCGCGCGGCC GGGCTGGAAC GGGTCGCCGC CGCCGTTCTC GGGGGTGACG CCCGGTGA
|
Protein sequence | MIPLPLARVA EITSGALNGL ADPEAVVRGP VVIDSRAVEP GSLFAAIKGS RADGHDFAQE ACAAGAVAVL ASRPVDAPAV IVRDVVAALA DLAAAVVAEL PSVTVVGVTG SQGKTTTKDL LAGLTERIGP TVAPVGSHNN EIGHPLTVLK ADERTRFLVL ELSARNVGHI AYLTRIAPPR IGVVLNVGAA HIGVFGGREA IAKAKGELVE ALPEDGVAVL NADDPYVREM AGRTRARVTW FGRSAEARIR AENETLDERG RASFTLCTPS GSAPVRLRLH GAHMVPDALA AAAVAYELGL PVVAIAEELS RAEPRSRWRM EVTDRADGVT VINDAYNASP DSVRAAFAAL RAMGDGRRRF AVVAAMRELG EAGAELNEEF GRIAAGSGLE ALIVVGDDAG PILAGAPGAI HVPDTDAAAR ELASRLAPGD VVLVKGPRAA GLERVAAAVL GGDAR
|
| |