| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_1402 |
|---|
| Symbol | |
|---|
| ID | 9167894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | + |
|---|
| Start bp | 1582646 |
|---|
| End bp | 1584220 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| Protein accession | YP_003652013 |
|---|
| Protein GI | 296269381 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.0526912 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCGG CAGCCGTCGA GGCCCGCCCG ATCTCCGGGC TGGCCGCGCT CCTCGGCGTG
CCCTCCGCAG TCCACCCGCC TCATCCCCGG GGCACCCGGG GAGTGATCAC CGGGATATCG
ATCGACTCGC GCCGCGTGCA GCGCGGCGAC CTGTACGTGG CCCTGCCGGG CAGCACGGCG
CACGGCGCCG ACTTCGCCGC GGAGGCGAGC GCCGCGGGCG CCGTCGCGAT CCTGACGGAC
GCGGCCGGGC GGGAGCGCGC TGTCGCGACC GGGCTGCCCG TGCTCGTCGT GCCCGATCCC
CGGGCCGTGC TCGGGCGGGT GGCCGCCTGG GTGTACGGCA ACCCGACCGC CGACCTGACG
ATCATCGGCG TGACCGGGAC CAGCGGCAAG AGCACCACGA CCTTCCTGAC CGAGGCGGGC
CTGCGGGCGG CCGGCCACCG CACCGGCCTG ATCGGCGGGG TGGAGATCCG GGTGGGGGAC
CTGCGGTTCC CCGCGCGGCT GACCACCCCG GAGGCGAGCG AGCTGCAGGC CCTGTTCGCG
CTCATGCGGG AACAGGGGGT CACCGCGGCC GCGATGGAGG TGTCCAGCCA CGCCCTCGCT
TTGGGGCGGG TGGCCGAGAT CATTTACGAT GTCGCCATCT TCACCAACCT CTCCCAAGAT
CATCTTGACT TCCATCGCGA CCTCGACGAC TACTTCGCCG CCAAGGCGCG GTTGTTCACC
CCGGACCACT CCCGGCTGGG CGTGGTGAAC ATCGACGATC GGTACGGCCG CGAGCTCGCC
GAGCGGGCGA AGATCCCGAT CACCACCTTC TCCCCGTCCG GCGACGCCGA CGCCGACTGG
CGGGTGGCGG ACGTCCGCCT CGGCGCCGAC GGGAGCGTCT TCCGGGTCGT CGGCCCGGGC
GGCGTGGAGA CCGACGTGAG CGTCGCCCTC CCGGGCGCCT TCAACGTGGC CAACGCGCTC
GCCGCGCTGG TCGCGCTGGT GGAGGCGGGC GTGCCCGTCC CGGCGGCGGT GGCCGGCATC
GGCATGACGA CCTGCGTCCC CGGCCGCATG GAGCGGGTCC CGGGCCCGGG GGACATCCAG
GTGTTCGTGG ACTACGCGCA CAAGCCCGCC GCGGTCGAGT CGGTGCTCCG CTCGCTCCGC
GCGGTGATGG GCTCCGGCCG CCGTCTCGTG ATCGTGGTGG GGTGCGGCGG CGACCGCGAC
CGGGGGAAGC GGCCGCTCAT GGGAGAGGCG GCCGCGCGGC TCGCCGATGC GGCGATCTTC
ACGAATGACA ACCCCCGGAG CGAGGACCCG CTCGCGATCC TCGCCGCCAT GCTCTCCGGG
GCGCTCCGGG TCCCGGCGGC GGAACGGGCC CACGTGATCG TGGAGCCGGA CCGGGCCGCC
GCCATCGACC TGGCGATTTC CACTGCCAGG TCCGGAGATG TGGTACTTGT GGCGGGTAAG
GGGCACGAGC AAGGTCAGTA TGTCGGAGGC CGGGTCATCC CCTTCGACGA CCGTGAGGTG
GCCGCGCAGG CCATCGCGCG ACGAGCCAGG GCGCACGCGG CCGGGCTGGT CGGCGAGAGG
GCCGGCGGTG GGTGA
|
|---|
| Protein sequence | MRPAAVEARP ISGLAALLGV PSAVHPPHPR GTRGVITGIS IDSRRVQRGD LYVALPGSTA
HGADFAAEAS AAGAVAILTD AAGRERAVAT GLPVLVVPDP RAVLGRVAAW VYGNPTADLT
IIGVTGTSGK STTTFLTEAG LRAAGHRTGL IGGVEIRVGD LRFPARLTTP EASELQALFA
LMREQGVTAA AMEVSSHALA LGRVAEIIYD VAIFTNLSQD HLDFHRDLDD YFAAKARLFT
PDHSRLGVVN IDDRYGRELA ERAKIPITTF SPSGDADADW RVADVRLGAD GSVFRVVGPG
GVETDVSVAL PGAFNVANAL AALVALVEAG VPVPAAVAGI GMTTCVPGRM ERVPGPGDIQ
VFVDYAHKPA AVESVLRSLR AVMGSGRRLV IVVGCGGDRD RGKRPLMGEA AARLADAAIF
TNDNPRSEDP LAILAAMLSG ALRVPAAERA HVIVEPDRAA AIDLAISTAR SGDVVLVAGK
GHEQGQYVGG RVIPFDDREV AAQAIARRAR AHAAGLVGER AGGG
|
|---|
| |