Gene Tbis_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1396 
Symbol 
ID9167888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1575493 
End bp1576710 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content77% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003652007 
Protein GI296269375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.60461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00977716 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGGGT TGAAGGCCCT GACGTCCCGG GGGCGCTCCT TCCTCGCCGC CGGGGTGGCC 
GCGCTGGCCT GCGCGATCGT CCTCGGCGAG CAGGACCTGG TGCGGATCGC CGTGCTGGTG
CTCGCGCTGC CGCTGCTCGC CGCCCTGGTG GTGGCGCGGA CCCGCTACCG GCTCACCTGC
GCCCGCCGCC TGGAGCCGGC CCGGGTCGAG GCCGGGGCGA CGAGCACCGT CATGATCCGG
CTCTCCAACG CCACGCGGCT GCCCACCGGG CTGCTGCTGG TGGAGGACAC GCTCCCCTCC
GCACTCGAGG CCGCGCCCAG GTACGCGCTC GACCGGGTGG AGCCGCACGG GGTCCGGGAG
ATCCGCTACA CGGTACGGCC GGCCGTGCGC GGGCGCTACC CCATCGGCCC GCTCACCGTG
CGGATCACCG ACCCCTTCGG CCTGGTCGAG CTGGTGCGGT CGTTCACCTT CGTCGACACC
CTCACCGTGA CGCCGCGGAT CGAGCCGCTG CCCAGGGTGC GGCTGTCCGG GGAGTGGGGC
GACGGCGGCG AGGGCCGTAC CCGGTCGATC GCCACAGCCG GGGACGACGA CGTCGCGCCG
CGCGAGTACC GGCACGGCGA CGAGCTGCGG CGGGTCCACT GGCGGTCCAC GGCGCGGCGC
GGGGAGCTGA TGGTCCGGCG CGAGGAGCAG CAGTGGGAGA GCCGGGGGAC GCTGCTGCTC
GACACCCGCC GGTGGGCGCA CCGGGGCGAC GGGGCCGCCT CCTCGTTCGA GGCGGCGGTC
TCGGCCGCGG CCTCGATCGG CGCGGCCCTC GCCCAGGACG GGCTCACCCT GCGGCTCGTC
ACCGACGAGG GCCGCCGGCG GCCGGCCGAG GCCGGGGCGT GGCCGCTCCT CGACATGCTC
GCGGTGGTGC GGGAGAGCCC GCTGTACTCC CTGGAGCAGG GGATCGCCGC CCTCCGGCAG
GACGGCGACG GGCTGATCAT CGCCGTGCTC GGCGCGCTCC ACCCCGAGGA CGCGCGCGCC
CTCGCCGGGC TGCGGCGGCA CGGCGTGAAC GCGGTCGCGG TGCTGCTCGA CGTCGCCACC
TGGGGCGGGC ACCCCGACGA GACGGCCGGT CAGGCCCGGG CGCTGCTCAC CGGCGCCGGG
TGGCGGGTGC TCGACCTGGC CAAGGACACC CCGCTCGCCG CGGTCTGGCC CCAGGCGGGG
AGGAGGCGCG CGGCATGA
 
Protein sequence
MTGLKALTSR GRSFLAAGVA ALACAIVLGE QDLVRIAVLV LALPLLAALV VARTRYRLTC 
ARRLEPARVE AGATSTVMIR LSNATRLPTG LLLVEDTLPS ALEAAPRYAL DRVEPHGVRE
IRYTVRPAVR GRYPIGPLTV RITDPFGLVE LVRSFTFVDT LTVTPRIEPL PRVRLSGEWG
DGGEGRTRSI ATAGDDDVAP REYRHGDELR RVHWRSTARR GELMVRREEQ QWESRGTLLL
DTRRWAHRGD GAASSFEAAV SAAASIGAAL AQDGLTLRLV TDEGRRRPAE AGAWPLLDML
AVVRESPLYS LEQGIAALRQ DGDGLIIAVL GALHPEDARA LAGLRRHGVN AVAVLLDVAT
WGGHPDETAG QARALLTGAG WRVLDLAKDT PLAAVWPQAG RRRAA