Gene Tbis_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1378 
Symbol 
ID9167870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1557892 
End bp1558866 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content73% 
IMG OID 
Productaliphatic sulfonates family ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_003651989 
Protein GI296269357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.355919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.459333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA AGCTGCTCGC CGTGCTCCTG CTCGTCGCCA CCGGCACGGC CTGCGCCACG 
GCGGGGAACG GCGGCGGCGC CCCGGCCGAT ACCGTGACCC TCCGCATCGG CGACCAGAAG
GCCGGCTCCC GGGCCGTGCT CGAGGCCGCG GGTCTCCTCG AGGGCACCCC GTACCGGATC
ACCTGGGCCC AGTTCACCTC CGGCCCGCCG CTGCTCGAGG CGGTCCACGC CGGGGCCGTG
GACATCGGCG GCGTCGGCAA CACCCCGCCG ATCTTCGCCG CGGCGGCGGG CTCGCGGATC
ACCGTGGTGG CGGCATTCCG GCAGAACCCG GTCGGGGCCG CGATCCTCGT GCCCGACGGC
TCCCCGATCA CCACCCCCGC CCAGCTCAAG GGCAAGCGGG TCGCGGTGGC CAAGGGCAGC
TCGGCGCACT ACCACCTGCT CGCCGTGCTC AAGCAGGCCG GGCTCTCCTT CGCCGACATC
CAGCCGCAGT ACCTCCAGCC GGCCGACGCG CTCGCCGCGT TCTCCTCGGG CACCGTCGAC
GCCTGGGCGA TCTGGGAGCC GTTCACCTCG CAGGCGCGGC TCGAGCACAA GGCGCGGGTG
CTGACCGACG GCACCGCCTA CGTGAACGGC CTCAACTTCC AGGTCGCCTC CCCGGCCGCG
CTCCAGGACC CGGCCAAGGA GGCGGCGATC CGCGACTTCC TCGAGCGGCT CGCCAAGGCG
CGGACCTGGG CCATATCGCA CCAATCCGAA TGGGCGAAGG TCTGGTCGGC GGAGACCGGC
CTGCCCCTGC GGGTGACCGA GGCCGCGGCC GCCAACTACG TCATGCGCCC CATCCCCATC
GACGGCTCCG TCGTCTCCTC CGAGCAGGAG ATGGCCGACG CGTTCGCGGC CGAGGGCCTG
ATCCCCCGCG CCATCGACTT CGCGGAGTTC GTCGACGACC GGTTCAACGA CATTCTCGGG
AAGGGACAGC AGTGA
 
Protein sequence
MIKKLLAVLL LVATGTACAT AGNGGGAPAD TVTLRIGDQK AGSRAVLEAA GLLEGTPYRI 
TWAQFTSGPP LLEAVHAGAV DIGGVGNTPP IFAAAAGSRI TVVAAFRQNP VGAAILVPDG
SPITTPAQLK GKRVAVAKGS SAHYHLLAVL KQAGLSFADI QPQYLQPADA LAAFSSGTVD
AWAIWEPFTS QARLEHKARV LTDGTAYVNG LNFQVASPAA LQDPAKEAAI RDFLERLAKA
RTWAISHQSE WAKVWSAETG LPLRVTEAAA ANYVMRPIPI DGSVVSSEQE MADAFAAEGL
IPRAIDFAEF VDDRFNDILG KGQQ