Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbis_1378 |
Symbol | |
ID | 9167870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobispora bispora DSM 43833 |
Kingdom | Bacteria |
Replicon accession | NC_014165 |
Strand | - |
Start bp | 1557892 |
End bp | 1558866 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | aliphatic sulfonates family ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_003651989 |
Protein GI | 296269357 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.355919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.459333 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGA AGCTGCTCGC CGTGCTCCTG CTCGTCGCCA CCGGCACGGC CTGCGCCACG GCGGGGAACG GCGGCGGCGC CCCGGCCGAT ACCGTGACCC TCCGCATCGG CGACCAGAAG GCCGGCTCCC GGGCCGTGCT CGAGGCCGCG GGTCTCCTCG AGGGCACCCC GTACCGGATC ACCTGGGCCC AGTTCACCTC CGGCCCGCCG CTGCTCGAGG CGGTCCACGC CGGGGCCGTG GACATCGGCG GCGTCGGCAA CACCCCGCCG ATCTTCGCCG CGGCGGCGGG CTCGCGGATC ACCGTGGTGG CGGCATTCCG GCAGAACCCG GTCGGGGCCG CGATCCTCGT GCCCGACGGC TCCCCGATCA CCACCCCCGC CCAGCTCAAG GGCAAGCGGG TCGCGGTGGC CAAGGGCAGC TCGGCGCACT ACCACCTGCT CGCCGTGCTC AAGCAGGCCG GGCTCTCCTT CGCCGACATC CAGCCGCAGT ACCTCCAGCC GGCCGACGCG CTCGCCGCGT TCTCCTCGGG CACCGTCGAC GCCTGGGCGA TCTGGGAGCC GTTCACCTCG CAGGCGCGGC TCGAGCACAA GGCGCGGGTG CTGACCGACG GCACCGCCTA CGTGAACGGC CTCAACTTCC AGGTCGCCTC CCCGGCCGCG CTCCAGGACC CGGCCAAGGA GGCGGCGATC CGCGACTTCC TCGAGCGGCT CGCCAAGGCG CGGACCTGGG CCATATCGCA CCAATCCGAA TGGGCGAAGG TCTGGTCGGC GGAGACCGGC CTGCCCCTGC GGGTGACCGA GGCCGCGGCC GCCAACTACG TCATGCGCCC CATCCCCATC GACGGCTCCG TCGTCTCCTC CGAGCAGGAG ATGGCCGACG CGTTCGCGGC CGAGGGCCTG ATCCCCCGCG CCATCGACTT CGCGGAGTTC GTCGACGACC GGTTCAACGA CATTCTCGGG AAGGGACAGC AGTGA
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Protein sequence | MIKKLLAVLL LVATGTACAT AGNGGGAPAD TVTLRIGDQK AGSRAVLEAA GLLEGTPYRI TWAQFTSGPP LLEAVHAGAV DIGGVGNTPP IFAAAAGSRI TVVAAFRQNP VGAAILVPDG SPITTPAQLK GKRVAVAKGS SAHYHLLAVL KQAGLSFADI QPQYLQPADA LAAFSSGTVD AWAIWEPFTS QARLEHKARV LTDGTAYVNG LNFQVASPAA LQDPAKEAAI RDFLERLAKA RTWAISHQSE WAKVWSAETG LPLRVTEAAA ANYVMRPIPI DGSVVSSEQE MADAFAAEGL IPRAIDFAEF VDDRFNDILG KGQQ
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