Gene Tbis_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1344 
Symbol 
ID9167836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1521043 
End bp1522119 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content73% 
IMG OID 
Productpolyprenyl synthetase 
Protein accessionYP_003651955 
Protein GI296269323 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.522192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.000335452 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCACTT CCGCCGCTCC GCTCGACGTC GTCCGACCTG AGGTGGACCG TTCGATCCGG 
CGGTTCCTCG ACCGCCAGCG GCCGCTGTTC TTCGACGACC CGCAGCTGGC CACGCTCCTG
GACGCCGCCG AGGCCTTCCT GTCCGGTGGC AAACGGCTCC GCCCCGCCTT CTGCTACTGG
GGGTGGCGAG CGGCGGGGGG AGGATCCGAC GACGCCCGCC TGTACAACGC GGCCGCCTCG
CTGGAGCTGC TCCAGGCGAG CGCCCTCATC CACGACGACG TGATGGACGC GAGCGACGTG
CGCCGGGGCA TGCCGTCGGC GCACCGCCGG TTCGAGCGCA TGCACCTGGA GTCCCGCTGG
CACGGCTCGG CCGCGCAGTT CGGGGAGAAC GCCGCGGTGC TCCTCGGCAA CCTGCTCCTG
GTCTGGGCCG GTGAGATGTG GCGCACCAGC GGCCTGCCGG CCGAGGCGCT CGCCGTCGCC
CAGCCGGTCC ACGACCACAT GCTCACCGAG CTCATGTGCG GGCAGTACCT CGACCTGCTG
GAGCAGGCGC AGGGCGAGGG CACGTTCGAC AGCGCGCTCC GGGTGGCGCT CTACAAGAGC
GGCAAGTACT CGGTCGAGCA GCCGCTCCGG CTCGGGCTGC TCCTCGCCGC CCAGAGCCGG
CTCCCGTGGA TCGACACCCT CTGCGCGCAG TACGGCCAGC GGGTGGGGAT CGCGTTCCAG
CTCCGCGACG ACATCCTCGG GGTCTTCGGC GACCCGGCCG AGACCGGCAA GCCCGCCGGG
GACGACCTGC GCGAGGGCAA GCGCACCATG CTCATCGCCC GCACCCTCGC CCAGGCGACG
CCGGAGCAGG CGGAGGTGGT CCGCAAGCTG CTCGGCAACC CCGATCTCGA CGCCGAGGGC
GTGGCCACGC TCCGGACGAT CATCGAGGAG ACGGGCGCGC TCGCCGCGTG CGAGGAGATG
ATCAAGCGCT ACCTCGACGA GGCGCTGCAC GCGCTCCAGG AGGCGCCCAT CATCGACGAG
AGCGCCCGCT CCGCCCTGGC CGCGCTCGCG GTCGCGGCGA CCACGCGGCG CACCTGA
 
Protein sequence
MTTSAAPLDV VRPEVDRSIR RFLDRQRPLF FDDPQLATLL DAAEAFLSGG KRLRPAFCYW 
GWRAAGGGSD DARLYNAAAS LELLQASALI HDDVMDASDV RRGMPSAHRR FERMHLESRW
HGSAAQFGEN AAVLLGNLLL VWAGEMWRTS GLPAEALAVA QPVHDHMLTE LMCGQYLDLL
EQAQGEGTFD SALRVALYKS GKYSVEQPLR LGLLLAAQSR LPWIDTLCAQ YGQRVGIAFQ
LRDDILGVFG DPAETGKPAG DDLREGKRTM LIARTLAQAT PEQAEVVRKL LGNPDLDAEG
VATLRTIIEE TGALAACEEM IKRYLDEALH ALQEAPIIDE SARSALAALA VAATTRRT