Gene Tbis_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1340 
Symbol 
ID9167832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1516980 
End bp1518107 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content75% 
IMG OID 
Productglycine oxidase ThiO 
Protein accessionYP_003651951 
Protein GI296269319 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.55181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0035061 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCAGAG AAACGGGCGC GCCCGCCGGT CACGACGTGA TCGTCGTGGG CGGCGGGGTG 
GCCGGCCTGT CCGCCGCCTG GCGCGCGGCG AAGCTCGGAC TGTCGGTGGC CGTGATCGAC
CCCCACCCCG GTCGCGGGGC CACGCACGTG TCGGGGGGCA TGCTCGCCCC GGTCAGCGAG
GTGACCTACA CCGAGGAGCC GCTGCTGCAG CTCGGCCTCG CCTCGCTGGC GCGGTGGCCG
GCCTTCCGGG ACGAGCTGCA GGAGGAGACC GGGATCGACC TCGACTACCG GACCGACGGC
ACCCTGCAGG TCGGCTACCA CTCCGACGAC ATGGCCTACC TCGATCGGCT CGCCGAGTTC
GAGCGGACGC TCGGGCTGCG GGTGGAGCGC CTCACCGGGC GGGAGTGCCG GGCCGAGGAG
CCGATGCTCT CCCCCTCGGT CCGCGGCGGC CTGCTCGCCC GGGACGACGC GTGGGTGAAC
CCGAGGAAGG TGGTCACCGC CCTGCTCGCC GCGGTGGACC GCCACGGCGT GCGGGTGATC
CCCGAGCGCG CCGCCGGGCT GGTCGCCGGC GGTGACTCCC CCGGCGTACG GCTCGGCTCG
GGCGAGGTGG TCCGGGGCGC GTGGGTGGTC GTCGCCGCGG GCGCGTGGTC GTCCGAGATC
CTCCCCGGCC TCCCGGTGCG GCCGGTCAAG GGGCAGATCC TCCGGCTGCG CGGCCCGGCC
GGCTTCCTGA GCCGGTGCGT GCGCGGCCTG GTGCACGGCT CCCCCGTCTA CCTCGTGCCC
CGGGGCGACG GCGAGATCAC GCTCGGCGCG ACCATGGAGG AGCTGGGGTT CGACGGGCGG
GTCACCGCGG GCGCGGTCTA CGAGCTCCTG CGCGACGCAC ACGAGCTCGT TCCCGGCGTC
ACCGAGCTCG AGCTGGCCGA GACCGCGACC GGCTTCCGGC CCGGGACACC GGACAACCTG
CCGCTCATCG GGCCGGCCGG GCCGCCGGGC GTGCTCGCCG CCACCGGCCA CGGCCGGGGC
GGCATCCTGC TGGCCCCCAT CTCCGCCGAG GCCATCGCGG CGTTCCTCAC CGATGGCCCG
GTACCGGATG TCGTCAAGTC CTGCGATCCA GGGAGATTCC GATCGTGA
 
Protein sequence
MPRETGAPAG HDVIVVGGGV AGLSAAWRAA KLGLSVAVID PHPGRGATHV SGGMLAPVSE 
VTYTEEPLLQ LGLASLARWP AFRDELQEET GIDLDYRTDG TLQVGYHSDD MAYLDRLAEF
ERTLGLRVER LTGRECRAEE PMLSPSVRGG LLARDDAWVN PRKVVTALLA AVDRHGVRVI
PERAAGLVAG GDSPGVRLGS GEVVRGAWVV VAAGAWSSEI LPGLPVRPVK GQILRLRGPA
GFLSRCVRGL VHGSPVYLVP RGDGEITLGA TMEELGFDGR VTAGAVYELL RDAHELVPGV
TELELAETAT GFRPGTPDNL PLIGPAGPPG VLAATGHGRG GILLAPISAE AIAAFLTDGP
VPDVVKSCDP GRFRS