Gene Tbis_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1110 
Symbol 
ID9167600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1259772 
End bp1261121 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content71% 
IMG OID 
Productmajor facilitator superfamily protein 
Protein accessionYP_003651725 
Protein GI296269093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.202583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCA AGGTCGCCCA CGGCCAGGCC GAAATCGGTC AACGCAGCGC CACCCCCGGC 
TTCAAGCGGG TGCTCACCGG CAGCATGATC GGTGCCGTCT TGGAGTGGTA CGACTTCGCG
GTCTACGGGG TGCTCGCCGC GACCGTTCTC GGACCGCTCT TCTTCCCCGG GGACGACGGG
TTCACCAAGC TCCTGCTCGC CCTCGCCACC CAGGGGATCG GCTTCGTCGC CCGCCCGCTC
GGCGGGATCG TCTTCGGCCA CCTCGGTGAC AGGTTCGGGC GCAAGCCCAT GCTGGTCGTC
ACCTTCCTGC TCATCGGCGG CGCCACCACG GCGATCGGCC TGCTCCCGAC CTATCACGAC
ATCGGGATCG CCGCGACCTT CCTGCTCGTC ATCCTGCGCC TGCTGCAGGG CTTCGGCCTC
GGCGGGGAGT TCGGCGCCGC CGTGCTGCTG GTGAGCGAGT ACGGCGAGCC GCGCCGCCGT
GGGTTCTGGG CGTCCTGGCC GCAGGCGGGC GCGCCGGCCG GCACGGTGCT CGCCGCCGCG
GTGATCACGG TGCTCGGGCT GACCGTCCCG GCGGGGAGCT TCGAGACCTG GGGCTGGCGG
ATCGCCTTCC TGCTCGCGGC GCCCCTGCTC GCCATCGGCT TCTGGATCCG CCGTGGCGTG
GAGGAGTCGC CGGTGTTCCA GCGCGCGCAG GAGAACGCCA AGGCGGCCCG GGCGGCCGCG
GAGGCGGAGA CGCACGGCCG GTCCAGCATC GTCCTCGCCC TCTCCCGGCC CCGTCAGGTG
GTCCGCGGGC TCGGCATGCG GCTCGGCGAG AACATCGCCT TCTACATCTA CACCGTCTTC
GTCATCGCCT ACGCCACGAC CTTCTTCGGA TTCGACCGCG GCGATGTGAC GCTCGCGGTC
ACCTTCGGCT CCCTGTTCCA GTTCATCGGC ATGATCGGCG GCGGCGCGTG GTCCGACCGG
GTCGGCCGCA AGACCGCCAT GCTGGTGGCG AGCGGCGTGC TGATCATCTG GGCGCCCACG
TTCTTCTGGC TGGTGCACTT CGAGAGCGTC CCGCTGCTGT GGATCGGCGT CTGCGTCGGC
GCGTTCTTCC ACGGCGCGCT GGCCGGGCCG GAGGCCGCCT GGATCAGCGA GCTCTTCCCG
ACCCGGTACC GCTACGCGGG TGCCTCCCTG GTCTTCCAGG GCTCGTCGAT CATCGCGGGC
GCCCCGGCCC CGTTCATCGC GGTGTGGCTG ATCAACGGCT TCGGGGTCGG CATGGTCATC
GCCTACCTGG TGGTCACCAT GGCGATCACG TTCATCGCGG TGGTCACCGG GCCGGAGACC
AGAGGGCTCG ACCTCGACCG GGTGGCATGA
 
Protein sequence
MTPKVAHGQA EIGQRSATPG FKRVLTGSMI GAVLEWYDFA VYGVLAATVL GPLFFPGDDG 
FTKLLLALAT QGIGFVARPL GGIVFGHLGD RFGRKPMLVV TFLLIGGATT AIGLLPTYHD
IGIAATFLLV ILRLLQGFGL GGEFGAAVLL VSEYGEPRRR GFWASWPQAG APAGTVLAAA
VITVLGLTVP AGSFETWGWR IAFLLAAPLL AIGFWIRRGV EESPVFQRAQ ENAKAARAAA
EAETHGRSSI VLALSRPRQV VRGLGMRLGE NIAFYIYTVF VIAYATTFFG FDRGDVTLAV
TFGSLFQFIG MIGGGAWSDR VGRKTAMLVA SGVLIIWAPT FFWLVHFESV PLLWIGVCVG
AFFHGALAGP EAAWISELFP TRYRYAGASL VFQGSSIIAG APAPFIAVWL INGFGVGMVI
AYLVVTMAIT FIAVVTGPET RGLDLDRVA