Gene Tbis_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1099 
Symbol 
ID9167589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1247208 
End bp1247993 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content75% 
IMG OID 
ProductDNA-(apurinic or apyrimidinic site) lyase 
Protein accessionYP_003651714 
Protein GI296269082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.521298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.100307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGG GCGACGCCGT CTACCGGGCC GCGAAGCGGC TCCGCGAGAG CCTCGACGGC 
CGGGTGCTCA CCCGGTCCGA GTTCCGGGTG CCCCGCCATG CGACCGCGGA CCTGCGCGGG
CGTGCCGTGC TCACCACCGT CTCCCGCGGC AAGCACCTGC TCACCCGGGT GGAGGGCGGG
CTCACCATCC ACACCCACCT GCGCATGGAC GGACGGTGGC GGATCGATCG GGCCGGCCGG
CCGATCCCGG GGGGCGATGT GGTGCGGCTG ATCCTCGCCA ATGAGACCTG GCAGGCGGTC
GGCATCCGGC TGGGGGTGAC GGAGCTGCTC CCCACGGACC GTGAGGATCG GGTGGTCGGT
CATCTCGGGC CCGACCCGCT CGGGCCGGAC TGGGACGCCG CGTGGGCCGC GCGGAACCTC
GCGCGCGCTC CCGGGCGGGC GATCGGTGAG GCACTGCTCG ATCAGCGGAA TCTGGCCGGG
CTCGGCACGA TCTGGCGGGC CGAGACGCTG TTCGCCGCGC GCATGTCGCC CTGGCGCGCG
GCCGGTTCCA TCCCCGTGGA CGAGCTGGAG GCGCTGGCGG CCATCGCCCG TGAGCTGCTG
GACGCGGCCA AGGACCAGCC GCTACCGGTC TCCACCGGTG ACCGCCGCCG GGGACGTGAG
CTCTTCGTGT ACGGCAGGGC CGGCCGCCCC TGCCGCCGCT GCGGCACCCC GATCAGCCGC
GGCGAGCTGG GGACCGCGCC GGACGAACGG CTGATCTACT GGTGCCCGGT CTGCCAGCCG
TCCTAG
 
Protein sequence
MPEGDAVYRA AKRLRESLDG RVLTRSEFRV PRHATADLRG RAVLTTVSRG KHLLTRVEGG 
LTIHTHLRMD GRWRIDRAGR PIPGGDVVRL ILANETWQAV GIRLGVTELL PTDREDRVVG
HLGPDPLGPD WDAAWAARNL ARAPGRAIGE ALLDQRNLAG LGTIWRAETL FAARMSPWRA
AGSIPVDELE ALAAIARELL DAAKDQPLPV STGDRRRGRE LFVYGRAGRP CRRCGTPISR
GELGTAPDER LIYWCPVCQP S