Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbis_1080 |
Symbol | |
ID | 9167570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobispora bispora DSM 43833 |
Kingdom | Bacteria |
Replicon accession | NC_014165 |
Strand | + |
Start bp | 1224761 |
End bp | 1225678 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | dihydrodipicolinate synthase |
Protein accession | YP_003651695 |
Protein GI | 296269063 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0649604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00385638 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCATCGC CAACTGGAAC TTCCGACGCC CCCTTCGGCC GCATGCTGAC CGCGATGGTG ACGCCGTTCA CGTCGGACGG AGCGGTCGAT TACGAGGCCG TCCAGTGCCT CGCGGAGTAC CTGGTCGACG AGCAGCGCAA CGACGGCCTG ATCGTCAACG GCACCACCGG GGAGTCCCCC ACCACGACGG ACGAGGAGAA GGAGCGCATC CTCCGGGCGG TCGTCGAGGC CGTCGGTGAC CGGGCCTTCG TCGTCGCCGG AGCCGGCACC AACGACACCC GGCACAGCGT CGAGCTGGCC AAGGCCGCCG AGCGGGCGGG CGTGCACGGC CTGCTCGTGG TGACGCCCTA CTACAACAAG CCACCGCAGG AGGGCCTCTA CCGGCACTTC TCCGCCGTCG CCGATGCCAC CGGCCTTCCG GTGATGCTCT ACGACATCCC CGGGCGGACC GGGGTGCCCA TCGCCACCGA GACACTGCTC CGGCTCGCCC AGCACCCGCG GATCGTCGCG GTGAAGGACG CCAAGGGCGA CCTGTTCGCG GCCTCCCAGG TGATGGCCGC CACCGATCTC GTGTTCTACT CGGGCGACGA CCTCATCAAC CTGCCGTGGC TCTCGGTCGG CGCGGCGGGG TTCGTGAGCG TGATCGGCCA CGTGGTCGGC GCCGATCTCG CCGCCATGAT CCAGCACCAC CGTTCCGGGA ACGTCGCCGG CGCCCTGGAG ATCCACCGCC GCCTGCTCCC GGTGGCCGCG GGGATCATGA CGCGCACCCA GGGGGCGATC ATGGCCAAGG CGGCCCTGAA GCTGGTCGGC CAGGACGCCG GCCATGTCCG GCTGCCGCTC GTGGACGCGA CCGAGGAGCA GATCTCCCTG CTCCGCGCGG ACCTGTGCGC GGCCGGCGTC AAGCTGGCCG ATGGCTGA
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Protein sequence | MASPTGTSDA PFGRMLTAMV TPFTSDGAVD YEAVQCLAEY LVDEQRNDGL IVNGTTGESP TTTDEEKERI LRAVVEAVGD RAFVVAGAGT NDTRHSVELA KAAERAGVHG LLVVTPYYNK PPQEGLYRHF SAVADATGLP VMLYDIPGRT GVPIATETLL RLAQHPRIVA VKDAKGDLFA ASQVMAATDL VFYSGDDLIN LPWLSVGAAG FVSVIGHVVG ADLAAMIQHH RSGNVAGALE IHRRLLPVAA GIMTRTQGAI MAKAALKLVG QDAGHVRLPL VDATEEQISL LRADLCAAGV KLADG
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