| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_1041 |
|---|
| Symbol | |
|---|
| ID | 9167531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | + |
|---|
| Start bp | 1179666 |
|---|
| End bp | 1180826 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
|---|
| Protein accession | YP_003651656 |
|---|
| Protein GI | 296269024 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0186953 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTTG ATCTCGGGAT TCCCACAGTC CGGACCAAGC CGATCGCCAA GCGGCGGGTG
TCCCGGCAGA TCATGGTCGG CTCGGTTCCG GTCGGCGGTG ACGCGCCGAT ATCGGTCCAG
TCGATGACCA CCACGGTCAC GGCGGACGTC AACGCCACAC TCCAGCAGAT CGCCGAGCTC
ACCGCGGCCG GATGCCAGAT CGTGCGCGTC GCCGTGCCCT CCCAGGACGA CGCGGACGCG
CTGCCGGAGA TCGCGAAACG GTCCCCGATC CCGGTGATCG CCGACATCCA CTTCCAGCCG
AAGTACGTGT TCGCCGCGAT CGACGCCGGC TGCGCCGGCG TGCGGGTGAA CCCCGGCAAC
ATCAAGAAGT TCGACGACAA GGTGGCCGAG ATCGCGAAGG CCGCCTCGGA CGCGGGGGTC
CCCATCCGCA TCGGCGTCAA CGCCGGCTCG CTCGACCCGC GGTTCCTCAA GAAGTACGGC
AAGGCCACCC CCGAGGCCCT GGTCGAGTCG GCGCTGTGGG AGTGCTCGCT CTTCGAGGAG
CACGGCTTCC GGGACATCAA GATCTCGGTG AAGCACCACG ACCCGGTGGT GATGATCCAG
GCGTACCGGC TGCTCGCCGA GCGGTGCGAC TACCCGCTGC ACCTGGGCGT CACCGAGGCG
GGGCCCGCCT TCCAGGGCAC GATCAAGTCC GCGGTGGCGT TCGGCGCGCT GCTCGCCGAG
GGGATCGGCG ACACGATCCG CGTCTCGCTC TCCGCGCCGC CCGTGGAAGA GGTGAAGGTC
GGCACCCAGA TCCTGGAGGC GCTCGGGCTC CGGGAGCGCG GCCTGGAGAT CGTCTCCTGC
CCGTCGTGCG GGCGCGCCCA GGTCGACGTG TACACCCTCG CCGAGCAGGT GCAGGCGGGC
CTGTCCGGCC TGAAGATGCC GCTGCGGGTC GCCGTGATGG GCTGCGTGGT GAACGGGCCG
GGCGAGGCGC GCGAGGCCGA CCTCGGCGTG GCCTCCGGCA ACGGCAAGGG CCAGATCTTC
GTCAAGGGCA AGGTCATCAA GACCGTGCCG GAGTCGCAGA TCGTCGAGAC GCTGATCGAG
GAGGCGCTCC GCCTCGCCGA GGAGATGGGC GTGGACCCGG AGAGCGGCGA GGGCACCGGC
CCGCAGGTGG TCGTCCGCTA G
|
|---|
| Protein sequence | MSVDLGIPTV RTKPIAKRRV SRQIMVGSVP VGGDAPISVQ SMTTTVTADV NATLQQIAEL
TAAGCQIVRV AVPSQDDADA LPEIAKRSPI PVIADIHFQP KYVFAAIDAG CAGVRVNPGN
IKKFDDKVAE IAKAASDAGV PIRIGVNAGS LDPRFLKKYG KATPEALVES ALWECSLFEE
HGFRDIKISV KHHDPVVMIQ AYRLLAERCD YPLHLGVTEA GPAFQGTIKS AVAFGALLAE
GIGDTIRVSL SAPPVEEVKV GTQILEALGL RERGLEIVSC PSCGRAQVDV YTLAEQVQAG
LSGLKMPLRV AVMGCVVNGP GEAREADLGV ASGNGKGQIF VKGKVIKTVP ESQIVETLIE
EALRLAEEMG VDPESGEGTG PQVVVR
|
|---|
| |