Gene Tbis_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1040 
Symbol 
ID9167530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1178206 
End bp1179324 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content70% 
IMG OID 
Productchitin-binding domain 3 protein 
Protein accessionYP_003651655 
Protein GI296269023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0290504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAAGAC TTCGTAGAAG CACGTCGAAA ACGACAGTCA GCATCTCAGC CGCGGCGCTC 
GCGGCCCTCG TGGCCAGTGT CCTGCCGTCG TCCCCGGCGG CGGCGCACGG CGCGATGATG
ATGCCCGGCA GCCGCACCTA CCTGTGCTGG AAGGACGGCC TCACCCCGCA GGGCAACATC
GTGCCGAACA ACCCCGCCTG CGCGGCCGCG GTGGCCCAGA GCGGCACCAA CGCCCTGTAC
AACTGGTTCG CCGTGCTCCG CTCGGACGGC GCCGGGCGGA CGCGCGGGTA CATCCCCGAC
GGCAAGCTGT GCAGCGCGGA CGCCAAGGTC TATGACTTCA GCGGTTTCGA CCTGGCCCGG
GACGACTGGC CCGTCACCCA CCTGACGGCG GGCGCCACCA TCCAGATCCG GTACAACATG
TGGGCCCACC ACCCGGGCAC CTTCCGCCTG TACGTCACCA AGGACTCCTG GGACCCGAAC
CGCCCGCTCA GCTGGGACGA CCTGGAGCCC ACGCCGTTCA GCGAGGTCAC CGACCCGCCG
AGCGTCGGCT CGCCGGGCAA CGAGGACGCC TACTACTACT GGAACGCCAA GCTGCCCGAG
AACAAGTCGG GGCGGCACAT CATCTACTCG ATCTGGCAGC GGTCCGACAG CCAGGAGACC
TTCTACAACT GCTCTGACGT CGTGTTCGAC GGCGGCAACG GCGAGGTGAC CGGCATCGGC
CCCGGCTCCG GCGGCCCGAC CAACCCGCCG AGCAGCCCGC CGGTCTCGCC GCCCGTCTCC
CCGCCGGTCT CTCCGCCGGT CTCCCCGCCG CCGTCGGAGC GTCAGTGCAC GGCGACCTAC
CGGGTCGTCA ACTCCTGGAG CGGCGGCTTC CAGGGTGAGG TCACCGTCCA CAACTCGGGC
CACACGGCGC TGTCCGGCTG GAGCGTGAGC TGGCAGCCGG CGAGCGGCCA GTCCATCACC
CAGGTCTGGA ACGGCCGGCT CAGCCAGTCG AACGGCACCG TCACGGTGAA GAACGAGAGC
TGGAACGGCA ACGTGGAGGC GCACGGGTCC ACCACGTTCG GCTTCATCGC GAACGGGCCG
AGCGACGAGG CTCCGTCGGT GTCCTGCGAG GCCTCCTGA
 
Protein sequence
MGRLRRSTSK TTVSISAAAL AALVASVLPS SPAAAHGAMM MPGSRTYLCW KDGLTPQGNI 
VPNNPACAAA VAQSGTNALY NWFAVLRSDG AGRTRGYIPD GKLCSADAKV YDFSGFDLAR
DDWPVTHLTA GATIQIRYNM WAHHPGTFRL YVTKDSWDPN RPLSWDDLEP TPFSEVTDPP
SVGSPGNEDA YYYWNAKLPE NKSGRHIIYS IWQRSDSQET FYNCSDVVFD GGNGEVTGIG
PGSGGPTNPP SSPPVSPPVS PPVSPPVSPP PSERQCTATY RVVNSWSGGF QGEVTVHNSG
HTALSGWSVS WQPASGQSIT QVWNGRLSQS NGTVTVKNES WNGNVEAHGS TTFGFIANGP
SDEAPSVSCE AS