Gene Tbis_0967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0967 
Symbol 
ID9167454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1091746 
End bp1092681 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content71% 
IMG OID 
ProductRpoD subfamily RNA polymerase sigma-70 
Protein accessionYP_003651583 
Protein GI296268951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.472284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.137887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGG GGAATCTGAC GCAGGACCAG GCCACCTCCG AGCGGGACCT TTTGGGGACC 
TACCTGGCCG AGATCGGGCG GGTTCCCTTG CTGACCGCCG AGGAGGAGGT GGAACTGGCC
AAGCGCATCG AGGCCGGTCT CTTCGCGGAG TACCTGCTCG ACAGCGCGTT GACCGAGCCG
AGGATCGGGG ACGCGACCGA CGAGGAGCTG GAGCGGATCG CCATCTCAGG GCGGCGGGCC
AAGGACGAGT TCATCAAGGC CAACCTCCGG CTGGTGGTCG CCGTGGCGCG GAAGTACGCG
GGCCGGGGCA TGCCCCTGAT CGACCTCGTC CAAGAGGGCA ACGTCGGCCT GGTGCGGGCG
GTGGAGAAGT TCGACTACCG GCGGGGGTAC AAGTTCTCCA CCTACGCGAC CTGGTGGATC
CGGCAGGCCG TGGGGCGCTC GATCCACGAG CAGGGACGGC CGGTCCGGCT CCCCACCCAC
GCCGGTGAGC AGATGACCAG GCTGATGCGG GTCCGCCGGG ACATCCTCGC CGAGCAGGAG
ATGGAGCCGT CCGACGAGGA GCTCGCCGAC GTCCTCGACA TGCCGATCGA ACGGGTGCGG
GAGCTGCGGC GCTGGGCGTC CGACCCGGTC TCCCTCCAGC TCGGCGTCGG TGAGGAGGAC
GAGACCGAGC TGGGCGACAT GATCGCGGAC GACGCGTGGG CCGACCCCGA GCAGCAGGCC
ATCGACACGC TGGACAAGGA GCGGCTGGAA CGGTGGCTCA CCGACCTGGA CGGCCGGCTC
AGCGAGATGC TCCGCTGGCG CTACGGCCTG GTCGACGGCA AGGAGCACAC CCTCACCGAG
GTGGGGGAGC GGTACGGCAT CGGCCGGGAC CGGGCCCGGC GGATGGAGCG CGACGCCCTC
CGGCACCTGC GCAAGATGGC CACGGCGGCC GCGTGA
 
Protein sequence
MATGNLTQDQ ATSERDLLGT YLAEIGRVPL LTAEEEVELA KRIEAGLFAE YLLDSALTEP 
RIGDATDEEL ERIAISGRRA KDEFIKANLR LVVAVARKYA GRGMPLIDLV QEGNVGLVRA
VEKFDYRRGY KFSTYATWWI RQAVGRSIHE QGRPVRLPTH AGEQMTRLMR VRRDILAEQE
MEPSDEELAD VLDMPIERVR ELRRWASDPV SLQLGVGEED ETELGDMIAD DAWADPEQQA
IDTLDKERLE RWLTDLDGRL SEMLRWRYGL VDGKEHTLTE VGERYGIGRD RARRMERDAL
RHLRKMATAA A