Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbis_0886 |
Symbol | |
ID | 9167372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobispora bispora DSM 43833 |
Kingdom | Bacteria |
Replicon accession | NC_014165 |
Strand | + |
Start bp | 1011987 |
End bp | 1013804 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | transcription termination factor Rho |
Protein accession | YP_003651503 |
Protein GI | 296268871 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.562598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGACA CCACAGAAAT CCTCACCGAC GGCCAGGCCG CTGGCGACAC CCCCACGAGC GCCCCGGCCC GACCGCGTCG TCGCTCCGGC ACCGGCCTGG CCGGCATGGT GCTCCCTGAG CTGCAGCGCC TGGCGTCCAG CCTGGGCATC ACCGGCATCG GACGGATGCG CAAGAGCCAG CTCATCGCGG CCATTCAGGA GAAGCAGGCG CAGCTCGGGG AGGCCTCCAC CGAGCAGAAG GCGGCGGAGG AGACCGCCGC TGAGCGGCAG GCCGCGGAGC CGGCCGCCAC GGTCGCCGCC CCGGCCGGAT CGCAGGGTGA GCCCGCGTCT GGTGAGCCCG GGACGGGCGA TTCCGCACAG GGCGAGGCGG TGCAGGCCGA CCGCTCCGAG AGCCGGTCCG AGCGGGGTGA GCGCCGCGAG CGCCGGTCCC GCGGGGAGCG GCGCGAGCGG GCCGAGCAGC GCGCCGCCGA CGCCGGTGAG GGTCGTGGCC AGCAGCAGGG CGGCAAGGCC GACAGCGGCA AGGCGGAGAA CGGCAAGGCC GAGACCGGCA AGGCGGAGAC CAAGGCCGAG CAGCAGCAAC AGCAGCAGCC GGCCGAGGAG GGCCGCGGCC GCCGCGGCCG GTTCCGCGAG CGCAACCGCC GCGGGCGGGA CCGGTACGAG AACGGCGAGC CCGTGATCAG CGAGGACGAC GTCCTCATCC CGATCGCCGG GATCCTGGAC ATCCTCGACA ACTACGCGTT CGTGCGGACC AGCGGCTACC TGCCCGGTCC GAACGACGTG TACGTCTCGA TGTCCCAGAT CCGCAAGTAC GGCCTGCGCA AGGGTGACGT CGTCACCGGG GCGGTCCGGC AGCCGCGCGA GGGCGAGCGC AGGGAGAAGT TCAACGCGCT CGTCCGGCTC GACACGGTCA ACGGCATGGA CCCGGAGCAG GCGCGCAACC GGCCCGAGTT CAGCAAGCTC ACGCCGCTCT ACCCGCAGGA GCGGCTGAGG CTGGAGACCG AGCCGCACAT CCTCACCACG CGGATCATCG ACCTCGTCTC GCCGATCGGC AAGGGGCAGC GCGGCCTCAT CGTCTCGCCG CCCAAGGCGG GGAAGACCAT GGTGCTCCAG GCGATCGCGA ACGCGATCAC CCGCAACAAC CCGGAGTGCC ACCTGATGGT CGTCCTCGTG GACGAGCGTC CGGAAGAGGT CACCGACATG CAGCGGTCGG TGAAGGGCGA GGTCATCCAC TCGACCTTCG ACCGCCCCGC CGAGGACCAC ACCACGGTCG CCGAGCTCGC GATCGAGCGG GCCAAGCGCC TGGTCGAGCT CGGCCACGAC GTGGTCGTCC TGCTCGACTC GATCACCCGT CTCGGCCGCG CGTACAACCT CGCCGCGCCG GCGAGCGGGC GGATCCTGTC GGGTGGTGTG GACTCGACCG CGCTCTACCC GCCGAAGCGG TTCTTCGGCG CCGCGCGGAA CATCGAGAAC GGCGGATCGC TCACCATCAT CGCCACCGCG CTGGTGGAGA CCGGCTCGAA GATGGACGAG GTCATCTTCG AGGAGTTCAA GGGCACCGGC AACATGGAGC TCAAGCTCAG CCGGTCGCTC GCGGACAAGC GGATCTTCCC CGCGGTGGAC GTGGAGGCGT CCGGCACCCG CAAGGAGGAG CTCCTCATGA GCAAGGAGGA GCTGAACATC GTCTGGAAGC TCCGCCGGGT GCTGCACGCG CTCGACGCAC AGCAGGCGCT CGAGCTCCTT CTCGAGAAGA TGAAGGAGAC CAAGTCGAAC GCCGAGTTCC TGCTCCAGGT GCAGAAGACG GTCAACGACC GCGACTGA
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Protein sequence | MSDTTEILTD GQAAGDTPTS APARPRRRSG TGLAGMVLPE LQRLASSLGI TGIGRMRKSQ LIAAIQEKQA QLGEASTEQK AAEETAAERQ AAEPAATVAA PAGSQGEPAS GEPGTGDSAQ GEAVQADRSE SRSERGERRE RRSRGERRER AEQRAADAGE GRGQQQGGKA DSGKAENGKA ETGKAETKAE QQQQQQPAEE GRGRRGRFRE RNRRGRDRYE NGEPVISEDD VLIPIAGILD ILDNYAFVRT SGYLPGPNDV YVSMSQIRKY GLRKGDVVTG AVRQPREGER REKFNALVRL DTVNGMDPEQ ARNRPEFSKL TPLYPQERLR LETEPHILTT RIIDLVSPIG KGQRGLIVSP PKAGKTMVLQ AIANAITRNN PECHLMVVLV DERPEEVTDM QRSVKGEVIH STFDRPAEDH TTVAELAIER AKRLVELGHD VVVLLDSITR LGRAYNLAAP ASGRILSGGV DSTALYPPKR FFGAARNIEN GGSLTIIATA LVETGSKMDE VIFEEFKGTG NMELKLSRSL ADKRIFPAVD VEASGTRKEE LLMSKEELNI VWKLRRVLHA LDAQQALELL LEKMKETKSN AEFLLQVQKT VNDRD
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