Gene Tbis_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0886 
Symbol 
ID9167372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1011987 
End bp1013804 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscription termination factor Rho 
Protein accessionYP_003651503 
Protein GI296268871 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.562598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGACA CCACAGAAAT CCTCACCGAC GGCCAGGCCG CTGGCGACAC CCCCACGAGC 
GCCCCGGCCC GACCGCGTCG TCGCTCCGGC ACCGGCCTGG CCGGCATGGT GCTCCCTGAG
CTGCAGCGCC TGGCGTCCAG CCTGGGCATC ACCGGCATCG GACGGATGCG CAAGAGCCAG
CTCATCGCGG CCATTCAGGA GAAGCAGGCG CAGCTCGGGG AGGCCTCCAC CGAGCAGAAG
GCGGCGGAGG AGACCGCCGC TGAGCGGCAG GCCGCGGAGC CGGCCGCCAC GGTCGCCGCC
CCGGCCGGAT CGCAGGGTGA GCCCGCGTCT GGTGAGCCCG GGACGGGCGA TTCCGCACAG
GGCGAGGCGG TGCAGGCCGA CCGCTCCGAG AGCCGGTCCG AGCGGGGTGA GCGCCGCGAG
CGCCGGTCCC GCGGGGAGCG GCGCGAGCGG GCCGAGCAGC GCGCCGCCGA CGCCGGTGAG
GGTCGTGGCC AGCAGCAGGG CGGCAAGGCC GACAGCGGCA AGGCGGAGAA CGGCAAGGCC
GAGACCGGCA AGGCGGAGAC CAAGGCCGAG CAGCAGCAAC AGCAGCAGCC GGCCGAGGAG
GGCCGCGGCC GCCGCGGCCG GTTCCGCGAG CGCAACCGCC GCGGGCGGGA CCGGTACGAG
AACGGCGAGC CCGTGATCAG CGAGGACGAC GTCCTCATCC CGATCGCCGG GATCCTGGAC
ATCCTCGACA ACTACGCGTT CGTGCGGACC AGCGGCTACC TGCCCGGTCC GAACGACGTG
TACGTCTCGA TGTCCCAGAT CCGCAAGTAC GGCCTGCGCA AGGGTGACGT CGTCACCGGG
GCGGTCCGGC AGCCGCGCGA GGGCGAGCGC AGGGAGAAGT TCAACGCGCT CGTCCGGCTC
GACACGGTCA ACGGCATGGA CCCGGAGCAG GCGCGCAACC GGCCCGAGTT CAGCAAGCTC
ACGCCGCTCT ACCCGCAGGA GCGGCTGAGG CTGGAGACCG AGCCGCACAT CCTCACCACG
CGGATCATCG ACCTCGTCTC GCCGATCGGC AAGGGGCAGC GCGGCCTCAT CGTCTCGCCG
CCCAAGGCGG GGAAGACCAT GGTGCTCCAG GCGATCGCGA ACGCGATCAC CCGCAACAAC
CCGGAGTGCC ACCTGATGGT CGTCCTCGTG GACGAGCGTC CGGAAGAGGT CACCGACATG
CAGCGGTCGG TGAAGGGCGA GGTCATCCAC TCGACCTTCG ACCGCCCCGC CGAGGACCAC
ACCACGGTCG CCGAGCTCGC GATCGAGCGG GCCAAGCGCC TGGTCGAGCT CGGCCACGAC
GTGGTCGTCC TGCTCGACTC GATCACCCGT CTCGGCCGCG CGTACAACCT CGCCGCGCCG
GCGAGCGGGC GGATCCTGTC GGGTGGTGTG GACTCGACCG CGCTCTACCC GCCGAAGCGG
TTCTTCGGCG CCGCGCGGAA CATCGAGAAC GGCGGATCGC TCACCATCAT CGCCACCGCG
CTGGTGGAGA CCGGCTCGAA GATGGACGAG GTCATCTTCG AGGAGTTCAA GGGCACCGGC
AACATGGAGC TCAAGCTCAG CCGGTCGCTC GCGGACAAGC GGATCTTCCC CGCGGTGGAC
GTGGAGGCGT CCGGCACCCG CAAGGAGGAG CTCCTCATGA GCAAGGAGGA GCTGAACATC
GTCTGGAAGC TCCGCCGGGT GCTGCACGCG CTCGACGCAC AGCAGGCGCT CGAGCTCCTT
CTCGAGAAGA TGAAGGAGAC CAAGTCGAAC GCCGAGTTCC TGCTCCAGGT GCAGAAGACG
GTCAACGACC GCGACTGA
 
Protein sequence
MSDTTEILTD GQAAGDTPTS APARPRRRSG TGLAGMVLPE LQRLASSLGI TGIGRMRKSQ 
LIAAIQEKQA QLGEASTEQK AAEETAAERQ AAEPAATVAA PAGSQGEPAS GEPGTGDSAQ
GEAVQADRSE SRSERGERRE RRSRGERRER AEQRAADAGE GRGQQQGGKA DSGKAENGKA
ETGKAETKAE QQQQQQPAEE GRGRRGRFRE RNRRGRDRYE NGEPVISEDD VLIPIAGILD
ILDNYAFVRT SGYLPGPNDV YVSMSQIRKY GLRKGDVVTG AVRQPREGER REKFNALVRL
DTVNGMDPEQ ARNRPEFSKL TPLYPQERLR LETEPHILTT RIIDLVSPIG KGQRGLIVSP
PKAGKTMVLQ AIANAITRNN PECHLMVVLV DERPEEVTDM QRSVKGEVIH STFDRPAEDH
TTVAELAIER AKRLVELGHD VVVLLDSITR LGRAYNLAAP ASGRILSGGV DSTALYPPKR
FFGAARNIEN GGSLTIIATA LVETGSKMDE VIFEEFKGTG NMELKLSRSL ADKRIFPAVD
VEASGTRKEE LLMSKEELNI VWKLRRVLHA LDAQQALELL LEKMKETKSN AEFLLQVQKT
VNDRD