Gene Tbis_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0879 
Symbol 
ID9167365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1002346 
End bp1003653 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content73% 
IMG OID 
Producthomoserine dehydrogenase 
Protein accessionYP_003651496 
Protein GI296268864 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.150193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.561705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAACC CCAAACCCGG GCTGAAAGTC GCATTGCTGG GCTGCGGTGT CGTCGGGTCG 
CAGGTGGTGC GGCTCCTGCG CGAGCAGGCC GATGACCTGG CCGCCCGGAT CGGCGCTCCC
CTGGAGCTGG CCGGGGTGGC CGTGCGCCGG CCCGGCCGCA AGCGCGATGT CGACCTGGAC
CCCGCGCTGA TCACCACCGA CGCCGAGGCG CTGGTCACCC GGGACGACGT CGACATCGTC
GTCGAGGTGA TCGGCGGGAT CGAGCCCGCC AGGTCCCTGA TCCTCGCCGC CATGGCGAAG
GGCAAGTCGG TGGTCACGGC GAACAAGGCG CTGCTCGCCG AGGACGGTGC CACCATCCAC
CGGGCGGCGC GGGAGAACGG CGTGGACCTC TACTTCGAGG CCTCCGTCGC CGGGGCGATC
CCGCTGCTCC GCCCGCTGCG CGAGTCGCTC GCCGGTGACC GGATCCGCCG GGTGCTCGGC
ATCGTCAACG GCACCACCAA CTACATCCTG GACAAGATGG ACAGCACCGG GGCGTCGTTC
ACCGAGGCCC TGGAGGAGGC CCAGGCGCTG GGGTACGCCG AGGCCGACCC CACCGCCGAC
GTCGAGGGGT TCGACGCCGC CGCCAAGGCG GCGATCCTCG CCGGGCTCGC GTTCCACAGC
CGGGTCACCG CGGCCGACGT GCACCGCGAG GGCATCACCG AGATCACCGC CTCGGACGTG
GCCTCGGCGA AGGCCATGGG CTACGTGATC AAGCTGCTCG CGATCTGCGC GAAGACCGAG
GACGGCCGGT CGATCGGCGT CCGCGTGCAC CCCGCCATGA TCCCGAGGTC GCACCCGCTC
GCCGGGGTCC GGGAGGCGTA CAACGCGGTG TTCGTCGAGG CCGAGTCGGC CGGGCGGCTG
ATGTTCTACG GCGCGGGCGC GGGCGGCGCG CCCACCGCCT CGGCGGTGCT CGGCGACATC
GTCGCGGTGG CGCGCAACCG GCTCGCCGGC ACGGTCGGCC CGGAGGAGCT CACCTACGCC
GACCTGAAGG TCCACCCGAT GGGGGAGACG ATCACCCGGT ACTACGTCTC CCTCGACGTG
GCGGACAAGC CCGGCGTGCT CGCCCGGGTG GCCGAGGTCT TCGCCCGGCA CGACGTCTCC
ATCCAGACGG TCCGCCAGGA GGGGCGCGGC GACGACGCGC AGCTCGTCCT CGTCACCCAC
CAGGCCACGG ACGCGGCGCT CTCGGCCACC GTCCAGGACC TGGGCCGGCT CGACATCGTC
CGCGCCGTGG CGAGCGTGAT GCGGGTGGAG GGCGACGACA CCCCCTGA
 
Protein sequence
MTNPKPGLKV ALLGCGVVGS QVVRLLREQA DDLAARIGAP LELAGVAVRR PGRKRDVDLD 
PALITTDAEA LVTRDDVDIV VEVIGGIEPA RSLILAAMAK GKSVVTANKA LLAEDGATIH
RAARENGVDL YFEASVAGAI PLLRPLRESL AGDRIRRVLG IVNGTTNYIL DKMDSTGASF
TEALEEAQAL GYAEADPTAD VEGFDAAAKA AILAGLAFHS RVTAADVHRE GITEITASDV
ASAKAMGYVI KLLAICAKTE DGRSIGVRVH PAMIPRSHPL AGVREAYNAV FVEAESAGRL
MFYGAGAGGA PTASAVLGDI VAVARNRLAG TVGPEELTYA DLKVHPMGET ITRYYVSLDV
ADKPGVLARV AEVFARHDVS IQTVRQEGRG DDAQLVLVTH QATDAALSAT VQDLGRLDIV
RAVASVMRVE GDDTP