Gene Tbis_0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0843 
Symbol 
ID9167328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp958177 
End bp959589 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content71% 
IMG OID 
Productcarbohydrate binding family 6 
Protein accessionYP_003651460 
Protein GI296268828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.392015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTAC CGCTCCCCGT ACCCCTCGCG AGGCTCCGGC ATCCGATCCT CGCCCTGCTC 
CTCGCGAGCG CCGCGCTCCT CGCCGTCGCG GCCCGGCCCG CCTCGGCCTC CGTGCCCGGC
ACCCCCTCCG GATGGACGCT GATCTGGGCG GACGACTTCA ACGGCCCGGC CGGGTCGCTG
CCCTCGTCGA GCGACTGGAT CATCGACACC GGCCACTCGT ACCCCGGCGG CCCGGACCGG
TGGGGCACCG GTGAGATCCA GCGGTACACC GCCGACCCGG CGAACGTCAG CCTCGACGGC
AACGGCAACC TGCGCATCAC CCCGATCCGC ACCGCCAGCG GTGAGTGGAC CTCCGCCCGG
ATCGAGACCC GCCGGGCCGA CTTCAAGCCC GCCCCCGGCC GCATCCTGCG GATCGAAGGC
CGCATCCAGC TGCCGAACGT GACCGGCAAC GCCGCGCTCG GCTACTGGCC GGCCTTCTGG
GCGCTCGGCT CGCCGTACCG CGGCAACTAC TGGAACTGGC CGGAGATCGG CGAGTTCGAC
ATCATGGAGA ACGTCAACGG GCTCAACACC GTCTGGGGCG TGCTCCACTG CGGCGTCAAC
CCCGGCGGAC CGTGCAACGA GCCCAACGGC ATCGGCAACA GCCGGGCCTG CCCCGGGTCG
ACCTGCCAGT CCGGCTTCCA CACCTACCGC TTCGAGTGGG ACACCAGCGT CTCGCCCAAC
CAGCTCCGCT GGTACGTCGA CGGCCAGCTC TACCACACGG TGAGCCAGAA CCAGCTCGAC
GCGACGACCT GGTCGAAGAT GACCTCCCAC TCCGGCTACT TCCTGCTGCT CAACGTCGCC
ATGGGCGGCG CCTTCCCCGA CGGGGTCGCG GGCTTCCCCA CCCCGACCTC GGCCACCGTC
TCCGGGAAGC CGATGCTCGT CGACTACGTC GCCGTCTGGC AGAGCGGCTC CGGCTCGTCC
CCGTCCCCGT CCCCGTCGCC GTCGACGAGC CCGCAGCCCG GCGGGTTCGA CGCGCGGTCC
ATCATCCAGG CCGAGCACTA CAGCGCGCAG AGCGGCACGC AGCTCGAGCC GTGCAGTGAC
GAGGGCGGCG GCCAGAACGT CGGGTACATC GCCAACGGCG ACTGGCTCCG CTTCGACAAC
GTCGACTTCG GCTCGACCCC GGTGACCCAG TTCAAGGCGC GGGTCGCCTC CGGGGCGCCG
GAGGGGATCA GCGGGCTGGT GCAGGTGCGG CTCGACAGCC TCACCGCGCC GCCGATCGGT
GACTTCGCCA TCGCCAACAC CGGCGGCTGG CAGAGCTGGC GCACCGTGCC GGCCAACATC
AGCCCGGTGA CCGGCAAGCA CACCGTCTAC ATCACCTTCA GCAGCGGCCA GCCGGCCGAC
TTCGTGAACC TCAACTGGTT CACCTTCGAG TGA
 
Protein sequence
MRLPLPVPLA RLRHPILALL LASAALLAVA ARPASASVPG TPSGWTLIWA DDFNGPAGSL 
PSSSDWIIDT GHSYPGGPDR WGTGEIQRYT ADPANVSLDG NGNLRITPIR TASGEWTSAR
IETRRADFKP APGRILRIEG RIQLPNVTGN AALGYWPAFW ALGSPYRGNY WNWPEIGEFD
IMENVNGLNT VWGVLHCGVN PGGPCNEPNG IGNSRACPGS TCQSGFHTYR FEWDTSVSPN
QLRWYVDGQL YHTVSQNQLD ATTWSKMTSH SGYFLLLNVA MGGAFPDGVA GFPTPTSATV
SGKPMLVDYV AVWQSGSGSS PSPSPSPSTS PQPGGFDARS IIQAEHYSAQ SGTQLEPCSD
EGGGQNVGYI ANGDWLRFDN VDFGSTPVTQ FKARVASGAP EGISGLVQVR LDSLTAPPIG
DFAIANTGGW QSWRTVPANI SPVTGKHTVY ITFSSGQPAD FVNLNWFTFE