Gene Tbis_0665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0665 
Symbol 
ID9167149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp730726 
End bp731943 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content65% 
IMG OID 
Productisocitrate dehydrogenase, NADP-dependent 
Protein accessionYP_003651283 
Protein GI296268651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0826839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.106014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGA TCAAGGTTGC GGGTCCGGTA GTCGAGCTCG ACGGCGATGA GATGACCCGC 
ATCATCTGGC GGTTCATCAA GGAGCAGCTC ATCCTGCCCT ACCTCGACAT CGACCTGAAG
TACTACGACC TCGGCATCCA GAACCGCGAC GCCACGGACG ACCAGGTCAC GGTCGACGCG
GCGTACGCCA TCAAGAAGTA CGGGGTCGGG GTCAAGTGCG CCACGATCAC CCCGGACGAG
GCGCGCGTCA AGGAGTTCGG CCTGAAGAAG ATGTGGAAGT CCCCGAACGG GACGATCCGC
AACATCCTCG GCGGCGTGAT CTTCCGCGAG CCGATCATCA TGCGGAACAT CCCGCGGCTC
GTTCCGGGCT GGACCAAGCC GGTCGTGATC GGCCGTCACG CGTTCGGCGA CCAGTACCGC
GCCACCGACT TCCGGATCCC CGGCGAGGGC ACCCTCACCA TCACCTTCAC CCCGAAGGAC
GGCGGCGAGC CGATCGAGCA CCACGTCTAC GACTTCAACG GCCCCGGTGT CGCGCTCGCC
ATGTACAACC TGGACGAGTC CATCCGTGAC TTCGCCCGGG CCTCGATGCA GTACGGCCTG
ATGCGCGGCT ACCCCGTCTA CCTGTCCACG AAGAACACGA TCCTCAAGGC GTACGACGGG
CGGTTCAAGG ACATCTTCCA GGAGGTCTAC GAGAACGAGT TCAAGGAGAA GTTCGAGGCC
GCCGGGATCA CCTACGAGCA CCGCCTGATC GACGACATGG TCGCCTCCTC CCTCAAGTGG
GAGGGCGGCT ACGTGTGGGC CTGCAAGAAC TACGACGGCG ACGTGCAGTC GGACGCCATC
GCGCAGGGCT TCGGCTCGCT CGGCCTCATG ACCAGCGTGC TGATGACCCC GGACGGCAAG
ACCGTCGAGG CCGAGGCCGC GCACGGCACG GTCACCCGCC ACTACCGGCA GTACCAGCAG
GGCAAGCCCA CCTCGACCAA CCCGATCGCG TCGATCTTCG CCTGGACCCG CGGCCTGCAG
CACCGCGGCA AGCTGGACAA CCAGCCCGAG GTGATCGACT TCGCCCAGAA GCTCGAGCAG
GTCTGCATCG AGACCGTCGA GGGCGGCCAG ATGACCAAGG ACCTCGCGCT GCTCGTCGGC
GGCGACACCG AGTGGCTCAC CACCGAGGAG TTCCTCGGCG CCCTCGCGGA GAACCTCAAG
AAGAAGATGT CCGCCTGA
 
Protein sequence
MPKIKVAGPV VELDGDEMTR IIWRFIKEQL ILPYLDIDLK YYDLGIQNRD ATDDQVTVDA 
AYAIKKYGVG VKCATITPDE ARVKEFGLKK MWKSPNGTIR NILGGVIFRE PIIMRNIPRL
VPGWTKPVVI GRHAFGDQYR ATDFRIPGEG TLTITFTPKD GGEPIEHHVY DFNGPGVALA
MYNLDESIRD FARASMQYGL MRGYPVYLST KNTILKAYDG RFKDIFQEVY ENEFKEKFEA
AGITYEHRLI DDMVASSLKW EGGYVWACKN YDGDVQSDAI AQGFGSLGLM TSVLMTPDGK
TVEAEAAHGT VTRHYRQYQQ GKPTSTNPIA SIFAWTRGLQ HRGKLDNQPE VIDFAQKLEQ
VCIETVEGGQ MTKDLALLVG GDTEWLTTEE FLGALAENLK KKMSA