| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_0595 |
|---|
| Symbol | |
|---|
| ID | 9167079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | + |
|---|
| Start bp | 645093 |
|---|
| End bp | 645977 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_003651215 |
|---|
| Protein GI | 296268583 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.436943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATCGAG ACCCGGTGCG GTTCAGGCTC GACCTGGGGT ACGACGGCAC GGACTTTCAG
GGGTGGGCGC GGCAGCCCGG CCTGCGGACC GTCCAGGGGG AGCTGGAGGC CGCGCTCGCC
ACGCTGCTGC GGCTGGAGGC CCCGCCCCGG CTGACCGTGG CGGGCCGTAC CGACGCCGGG
GTGCACGCGC GCGGCCAGGT CGTCCACGTC GACCTCCCGC TCGCCGCGCT CGCCATCCTC
GAACCCCGCG GGAGGGAGAC GGCCACGCCG CCCGCGGAGC GCCTCCCGGA GCTGTGCTCC
GCGCTCGTCC GGCGGCTCGC CGCGGTGCTC CCGCCCGACG TCCGGGTCTT CGCCGTCTCC
GTGCCCCCGG ACGGCTTCGA CGCCCGGTTC TCCGCGCTCT GCCGGCGGTA CTGCTACCGC
GTCTGCGACG CCCCGGGCGG GGTGGACCCG CTGCGGCGGC GGGAGGTGCT CTGGTACCCC
AAGCCGCTCG ACGTCGAGCT GATGAACGCC GCCTCGGTCC GGCTGCTCGG CGAGCACGAC
TTCGCCGCCT TCTGCAAGAA GCGCGAGGGC GCGACGACCA TCCGGGAGCT CCGGCGGTTC
GAGTGGGCCC GGCGCGACGA CGGGATCATC GAGGCGACCG TGGTGGCGGA CGCCTTCTGC
CACTCCATGG TGCGGTCCCT GGTCGGCGCC GTGCTCGCCG TCGGGGAGGG CAAGCGGCCG
GTGGAGTGGC CGGCCGAGGT GCTCGCGCGA GCCGTGCGCG ACTCGGCCGT GCGCGTGGCC
CCGGCGCACG GCCTGACCCT GGAGGAGGTG CGCTACCCGG AGACCGCCGA GGAGCTGGCG
CGGCGCGCCG CCCAGGCCCG CCGGGTGCGC ACGCTCACTT CTTGA
|
|---|
| Protein sequence | MDRDPVRFRL DLGYDGTDFQ GWARQPGLRT VQGELEAALA TLLRLEAPPR LTVAGRTDAG
VHARGQVVHV DLPLAALAIL EPRGRETATP PAERLPELCS ALVRRLAAVL PPDVRVFAVS
VPPDGFDARF SALCRRYCYR VCDAPGGVDP LRRREVLWYP KPLDVELMNA ASVRLLGEHD
FAAFCKKREG ATTIRELRRF EWARRDDGII EATVVADAFC HSMVRSLVGA VLAVGEGKRP
VEWPAEVLAR AVRDSAVRVA PAHGLTLEEV RYPETAEELA RRAAQARRVR TLTS
|
|---|
| |