Gene Tbis_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0402 
Symbol 
ID9166883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp451848 
End bp453374 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content69% 
IMG OID 
Productmajor facilitator superfamily protein 
Protein accessionYP_003651023 
Protein GI296268391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.537567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.124421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCGG CGGGCCTACC GGCCGGCCAG GAGCGCGAAC AGCTCCGGTA TGCGTGGCGC 
GCCCTGTCGG TCGTCTGCAT GGCGAGCGTG CTCGCCACGA TCGGGGGGAA CGCCCTCAAC
GTCGCGCTTC CCAAGCTGGT CGACCAGACC AAGGCGAGTG CCGCGGCGGC GAGCTGGATC
CTGCTCGCCT TCCAGCTCAC CACCACCGTC CTGACGGTGA TCTTCGGGCG GCTCGCCGAC
ATGTTCGGCC GGCGCACCAT GTACCTGTGC GGCCTGGGCG TCTACACGCT CGCCAGCCTG
CTCGCCGGCA TGGCGCCCGA TCCCTGGCTG ATCGTGGGGA TGCGGGTCGT GCAGGCGGCC
GGCATGGCCA TGCTGCTCAC CAATAGCGCG GCGCTGATCA GCGATGCCTT TCCCCGCCAC
CGGCTCGGCG AGGGCATGGG GGTGTACACC GCGTCCTTCT CGATCTCCCA GCTCGCCGGC
CCCACCCTCG GCGGTCTTCT GGTCGAGCAT CTCGGATGGC GCTGGCTGTT CTGGTACAAC
GTGCCCCTCG GCATGGCATG CCTCATATGG GGCGCGATCG TGCTGCGGCG TCCCGCTCCC
GGCGAGGACG GTCAGCGGCT CGACCTGCCC GGCAGCTTCA TGATCCTGCT CAGCCTGGGC
GGGCTTCTCC TCGCGCTCTC CGAGGTGACC CGGCTGGGGT GGGCGCATCC GGTGATCCTG
GCCGGGCTCG CGTTCTTCGT CGTGCTGCTT CCGGTGTTCA TCGCCTGGGA GCTGCGCAGC
CCGCACCCCG TGGTCGACAT CCGGATGTTC CGTGACCCCA CGTTCGGCCT GGGCACGCTG
GCGTCCTTCC TCAGCTCGAT CGCGCGGATG GGGGTGGTGA TTCTCATCGC GCTGTTCTTC
CAGGCCGTGC ACGGCGATAC CGCGGTGGAG GCGAGCCTGA AGCTGCTCCC GCTCTCGATC
GCCGCGATGA TCGCCTCGGT GACGTCGGGC TTCCTGCAGC GCCGGTTCAG CCCGCGTTCC
CTGGCAATGT TCGGTTCGTC GTTGAGCACC GCCGGGCTGG GCACGCTGCT TCTCGTCATC
GGCGCCGATG CGCCGGCACT CGCCATCATG GCCGGCCTGC TGGTACTCGG TTTCGGCTCG
GGAACGTTCC TGCCGTCCAA TGCCACCGTG CTGCTCAGTG AGCTTCCGTC CAACCGGCTG
GGCATCATGA ACGCGATGCG GCTCATGCTG CAGAGCGTCG GCATCGTCGT GGGCACCGCG
CTCAGCCTGT CGATCATCAC GGCTCCGTTG CCGCCGGCAA TGCACGATCA CGTGTTCGCC
GGCACGCTCT CCCACGTATC GGACGCGGCC GTTCAGCGGC TCGTCACCGG ATACCGATGG
GCGCTCGCCT GCTTGGTGGG CATCTCCGCC CTCGCCACGC TCACCTGCCT CTGGCGTGGC
CACCTGGGAG AACCGGGAGG CGATCGGCGA GGTCATCGAG GCGGCGGTCA CGCTGATCCG
GCGGCTCGCC GCCCTGTGGC CGGGTGA
 
Protein sequence
MSSAGLPAGQ EREQLRYAWR ALSVVCMASV LATIGGNALN VALPKLVDQT KASAAAASWI 
LLAFQLTTTV LTVIFGRLAD MFGRRTMYLC GLGVYTLASL LAGMAPDPWL IVGMRVVQAA
GMAMLLTNSA ALISDAFPRH RLGEGMGVYT ASFSISQLAG PTLGGLLVEH LGWRWLFWYN
VPLGMACLIW GAIVLRRPAP GEDGQRLDLP GSFMILLSLG GLLLALSEVT RLGWAHPVIL
AGLAFFVVLL PVFIAWELRS PHPVVDIRMF RDPTFGLGTL ASFLSSIARM GVVILIALFF
QAVHGDTAVE ASLKLLPLSI AAMIASVTSG FLQRRFSPRS LAMFGSSLST AGLGTLLLVI
GADAPALAIM AGLLVLGFGS GTFLPSNATV LLSELPSNRL GIMNAMRLML QSVGIVVGTA
LSLSIITAPL PPAMHDHVFA GTLSHVSDAA VQRLVTGYRW ALACLVGISA LATLTCLWRG
HLGEPGGDRR GHRGGGHADP AARRPVAG