Gene Tbis_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0352 
Symbol 
ID9166829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp400569 
End bp401750 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content70% 
IMG OID 
Productfamily 12 glycoside hydrolase 
Protein accessionYP_003650975 
Protein GI296268343 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCCG CCGCGGCCCC TGTCATGGTC CATGCCATGA GCATGCGACG GTTCCTCGCC 
GGGCTGACCG TGCTCGGCTC GGTCGCCGCC TCGCTCGTCA TCGCCACCTC GGCGGCGCAG
GCGGACACCG TGATCTGCGA GAAGTGGGGC ACCACCACCA TCCAAGGCGG CAAGTACGTC
GTCCAGAACA ACAACTGGGG CAGCGACATC CAGCAGTGCA TCACCGTGAC CGACACCGGC
TTCACGGTGA GCCAGGCGAA CCACAACAAG CCCACCAACG GGGCACCCGG CGCGTACCCG
TCCGTCTTCG CCGGCTGCCA CTACGGCACC TGCTCCTCGG GGAGCCGGCT CCCCATGCAG
GCGACCGACA GCCTGTTCGA CACCATCCGG ACCAGCGTGC GGATGACCTA CCCGAGCTCG
GGGGTCTACA ACGCCTCGTA CGACCTGTGG TTCGACCCGA CCCCGCGCAC CGACGGGCAG
AACACCGGCG CCGAGATCAT GGTCTGGCTC AACCGGGTCG GCTCGATCCA GCCGATCGGC
TCCCGGGTCG ACACGGTGAA CCTCGCCGGC GCCACCTGGG AGGTCTGGTA CGGCAACACC
GGCTGGAACG TCATCTCGTA CGTGCGCACC ACCCCGGTCG ACTCGATCAG CTTCGCGGTG
CGCGAGTTCT TCGATGACGC GGTGCGCCGC GGGTACGCCC AGCGGTCGTG GTACCTCACC
AGCGTGCAGG CCGGGTTCGA GCCGTGGGTC GGCGGCACCG GGCTCACCGT GAACGAGTTC
TCCTACAGCG TCGGCGGCTC CGATCCCACC GAGCCGAGCC CGCCGGTCAC CACCTCGCCG
CCGGCGAGCC CGCCGCCCGG CGGCGCCGCG TGCCGGGTCG CCTACCGCAA GAACGAGTGG
CTGGGCGGGT TCACCGCCGA CGTCACCGTC ACCAACACCG GCTCGTCCGC GATCAACGGG
TGGAACCTGA CCTTCACCTT CCCCAGCGGC CAGCGGGTGA CCAACGGCTG GAACGCCACG
ATCTCCCAGA GCGGCGCCAC GGTGACCGCG CAGAACATGT CGTACAACGC GAGCATCCCG
CCGGGCGGGT CCGTGTCGTT CGGGTTCCAG GGCACCTGGA CCGGGTCGAA CGGCGATCCG
GCGGACTTCA CCCTCAACGG CACCCGGTGC CAGACCGCCT GA
 
Protein sequence
MRPAAAPVMV HAMSMRRFLA GLTVLGSVAA SLVIATSAAQ ADTVICEKWG TTTIQGGKYV 
VQNNNWGSDI QQCITVTDTG FTVSQANHNK PTNGAPGAYP SVFAGCHYGT CSSGSRLPMQ
ATDSLFDTIR TSVRMTYPSS GVYNASYDLW FDPTPRTDGQ NTGAEIMVWL NRVGSIQPIG
SRVDTVNLAG ATWEVWYGNT GWNVISYVRT TPVDSISFAV REFFDDAVRR GYAQRSWYLT
SVQAGFEPWV GGTGLTVNEF SYSVGGSDPT EPSPPVTTSP PASPPPGGAA CRVAYRKNEW
LGGFTADVTV TNTGSSAING WNLTFTFPSG QRVTNGWNAT ISQSGATVTA QNMSYNASIP
PGGSVSFGFQ GTWTGSNGDP ADFTLNGTRC QTA