Gene Tbis_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0227 
Symbol 
ID9166703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp271615 
End bp272880 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content74% 
IMG OID 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_003650852 
Protein GI296268220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCCA TCCGGCTTCC CACCGGCGAA CCAATGGGTG CGCCGCGGCG GAGGACCGCC 
GGCCGGGATC GGCCCATCCG GCCTCCCCCG CGCCCCGGCG GGCGAGCCGC GGCCTACCCT
GAGGGCGTGC CCGACGCGAC CCCTCCCGTG TCCGAGCGTG ACGAGGTGCT GCACGCGGTG
AGCTCGGCCG TGCTCGCCGT CACCAGCCAC CTGTCGGTCC AGGAGGTGCT GCGGGTGATC
GTGCGGTCGG CGCGCCGGCT CCTCGACGCC CAGTACGCGG CGCTCGGCGT GCCGGACAGC
CAGGGCGCTT TCGCGGAGTT CATCGCCGAG GGGGTCACCC CGGAGCAGTG GGCGGTCCTG
GGGACGACGC CGCGGCAGCA CGGCATGCTC GACGCGATGC TCCGCATGGA CGGGCCGGTA
CGGCTCGCCG ACATCCGCAA GGACCCCAGG TTCGTCGGGT GGCCGCGGGG GCACCCGATC
CTCAAGGACT TCCTCGGCGT GCCGATCCGC AACGGCGGTG AGGTGCTGGG GATCGTGTTC
CTCTCCAACA AGCGGACGCC CGGCGGGTTC ACCGAGGCCG ACGAGGAGCT GCTCACGCTG
TTCGCCGCGC ACGCCGCGAT CGCGATCACC AACGCCCGGC TGTACGAGCG GAGCCGTGAG
CTCACGGTGA TCGAGGAGCG GACCCGGATG GCCCGGGAGC TGCACGACGC GGTGACCCAG
AAGCTCTTCT CGCTCCGGCT CACCGCGCGG GCGGCCGCCA CGCTCGCCCG TACCGACCCC
GCGCGGGCCG CGCAGGAGAT CGAGCAGGTC GAGCGGCTGG CCGGGGAGGC GCTCGCCGAG
CTGCGCGCGG TCATCGTGGA GCTGCGCCCG GCCGAGCTCG ACCGCCACGG CCTGGTGGAG
ACCCTGCGCA AGCAGGTCGC CCTGCTCGAC CGCGTCCACC CGGTGTCGTT CGCCTTCCAC
TTCGACGGCG ACCCACCCCA CGGCCTGCCG CCGGCGGTCG AGGTCGCGGT GCTGCGGGTG
GCCCAGGAGG CGCTGCACAA CGCGGTGCGC CACGCGAACG CCACCCGCAT CGAGGTACGG
CTGTCGCACC GCAGGCCGGT GCTGACCCTT CAGGTGTGTG ACGACGGGCG CGGTTTCGAC
CCGGGACGGG TGCCCGGCCT CGGCCTCGCC TCGATCCGCG ATCGCGCCGA GGCGGTGGGC
GGGACGCTCA CCGTGACCAC CTCCCCCGGG CGCGGCACGG TCGTTCACTT GGAGGTGCCC
ACGTGA
 
Protein sequence
MSPIRLPTGE PMGAPRRRTA GRDRPIRPPP RPGGRAAAYP EGVPDATPPV SERDEVLHAV 
SSAVLAVTSH LSVQEVLRVI VRSARRLLDA QYAALGVPDS QGAFAEFIAE GVTPEQWAVL
GTTPRQHGML DAMLRMDGPV RLADIRKDPR FVGWPRGHPI LKDFLGVPIR NGGEVLGIVF
LSNKRTPGGF TEADEELLTL FAAHAAIAIT NARLYERSRE LTVIEERTRM ARELHDAVTQ
KLFSLRLTAR AAATLARTDP ARAAQEIEQV ERLAGEALAE LRAVIVELRP AELDRHGLVE
TLRKQVALLD RVHPVSFAFH FDGDPPHGLP PAVEVAVLRV AQEALHNAVR HANATRIEVR
LSHRRPVLTL QVCDDGRGFD PGRVPGLGLA SIRDRAEAVG GTLTVTTSPG RGTVVHLEVP
T