| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_0214 |
|---|
| Symbol | |
|---|
| ID | 9166690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | + |
|---|
| Start bp | 256308 |
|---|
| End bp | 257555 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_003650839 |
|---|
| Protein GI | 296268207 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGCC GCGCGCGTGG CGGCGCCGAG GTCATGGCCG GGGAAGGCGG GATGATGACC
CGGCCGGCCG GTGATCGGAC CGCGGCGCAG GCGGCCGTGC CGCCCGAGCT GGTCGAGGCG
GTCAGGGTAC GGCTGTCGCG GGCCGGTGCG CCGCCCACCG CCGCGCAGGT CGCCGCCGCC
CTCCGCGCGG AGCGGGCGGT TCTGGGCGAT GCCGAGGTGC TCGCCATCGG CCGCATCCTG
CGCGCCGACC TCGTCGGCGC GGGGCCACTG GAAGGCCTGC TCGCCCTGCC CGGGGTGACG
GACGTGCTGG TGAACGGGCC CCGGGAGGTG TGGATCGACG ACGGGAGCGG GCTGCGCAAG
ACCGACGTGA CCTTCTCGGG CGAGGAGGAG GTGCGGCGGC TGGCGCAGCG CCTCGCCGCC
ACGGCCGGGC GGCGCCTCGA CGACGCCTGC CCGTACGTCG ACGCTCGGCT GGCCGGCGGG
ATCCGCCTGC ACGCCGTCCT CCCGCCGATC GCGCGGGACG GCACCTGCCT GTCGCTCCGC
CTGCCGCCCC GGCGCACGTT CACGGTCGAG GAGCTCGTGC CCGGGGCCGG GGCGGAGCTC
CTCCGCGCCA TCGTGGCCGC CCGGATGGCG TTCCTCGTCA CCGGCGGAAC CGGAACGGGG
AAGACCACCC TCCTGGCGAG CATGCTCTCC TGCGCCGACC CCGGGGAGCG GCTGCTCCTG
GTCGAGGACT CGGCCGAGCT CAACCCACGG CATCCGCACG TCGTCCGGCT GGAGGCCAGA
CCGCCCAACC TCGAGGGCGC CGGAGGGATC ACCCTCCGCG ACCTCGTACG GCAGGCCCTC
CGGATGCGGC CCGACCGGCT GGTGGTCGGG GAGGTCCGTG GCGCTGAGGT CGTGGACCTG
CTGAGCGCCC TCAACACGGG CCATGAGGGC GGCTGCGGGA CGCTGCACGC GAACAACCCG
GCCGACGTCC CCGCCCGGCT GGAGGCGCTC GCCTGTGCGG CCGGGCTGTC CCGCGAGGCC
GTGCACAGCC AGATCGCCGC CGCTCTCGAC GTGGTCGTGC ACCTCGTCCG GGCCCCGGGC
GGCGGGCCGC GCCGGGTCGC GGAGGTGTGC CTGCTGGAAC GGGATCCCTC CGGGTTCGTG
ACCGCCAGAC CATCGGTGAT CTTCACTCCC GAGGGGAGGG CGGTACCGGG CCCGGCGTTC
GGCGCGCTCC GGGACAGGTG CCCGGTACCG CTGCCATGCC TGACCTGA
|
|---|
| Protein sequence | MTSRARGGAE VMAGEGGMMT RPAGDRTAAQ AAVPPELVEA VRVRLSRAGA PPTAAQVAAA
LRAERAVLGD AEVLAIGRIL RADLVGAGPL EGLLALPGVT DVLVNGPREV WIDDGSGLRK
TDVTFSGEEE VRRLAQRLAA TAGRRLDDAC PYVDARLAGG IRLHAVLPPI ARDGTCLSLR
LPPRRTFTVE ELVPGAGAEL LRAIVAARMA FLVTGGTGTG KTTLLASMLS CADPGERLLL
VEDSAELNPR HPHVVRLEAR PPNLEGAGGI TLRDLVRQAL RMRPDRLVVG EVRGAEVVDL
LSALNTGHEG GCGTLHANNP ADVPARLEAL ACAAGLSREA VHSQIAAALD VVVHLVRAPG
GGPRRVAEVC LLERDPSGFV TARPSVIFTP EGRAVPGPAF GALRDRCPVP LPCLT
|
|---|
| |