Gene Tbis_0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0182 
Symbol 
ID9166657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp214373 
End bp216850 
Gene Length2478 bp 
Protein Length825 aa 
Translation table11 
GC content79% 
IMG OID 
ProductECF subfamily RNA polymerase sigma-24 
Protein accessionYP_003650807 
Protein GI296268175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAGAA AGAACCGGCA ATCCGACGAG GAGCTGCTCG ACGCGGTCCG GAGGGGCGAC 
ACCTCCGCCT ACGGCATGCT CTACCAGCGC CACGTCCTGC CCGCCCGGGC CCTCGCCCGG
CGGCTGGTGC GGGGCGATGA AGAGGTGGAG GACGTCCTCG TCGAGACCTT CGCCGGGGTC
CTGGAGATCA TCCGACGCGG GGGCGGCCCC GGCTCCGCTT TCCGGCCCTT CCTGCTGGCG
TCGCTCCGCC GCTACGCCGC CGCCGGTGAG GTCGATCTCA CGGACCCGGA CGCCTGCTAC
GTGGACCCGG AGCTGGCCGG GCTCGAACAG GCCCCGCTCG CCCGGGCGTA CCGGTCGCTG
CCCGAGCGCT GGCGGGCCGT GCTCTGGCAC ATCGAGGTGG AGGGCGCCAC GCCCGCGGAG
ACGGCCCCGC TGCTCGGCAT GTCCGCCCGG CGCACCGCGC GGTTCGCCCG CGAGGCCCGC
GGCGCCCTCC GGGAGGCGTA CCTCGCGCTC CATGAGAGCG ACGCGCACGA CGAGGCGTGC
CGCCCGGTGC TCGCCCTGCT CCTGCGGCAC GTCGAAGGGC TGCTGCCCAA GCGCGAGGCC
CGCACGGTGG ACCAGCACAT CGCCGGGTGC ATCGAGTGCC GGTCGGTCTT CCTCGAGCTC
ACCGACGTGA CCCAAGGGCT CCGGATGATC GTCGGCCCGC TCTACGCCGG GCCGGCGGCG
GAGGACTACC TCAGCGATCT CCGCAGGGTG CGGCAGGAGG CGAGGCGCGG GCCGGTGCGC
GGGGTGCTCC TCCCCTTAGC GCGCCTGCTC CCCGGGTTGT GGCGGCGGCT GCCCCCGGCC
CAGCGGGCGG CCGCCGCCGG TGCCGCGCTG CTGCTCTCCG CGGTCACCGT CATCCTCTCC
GCCGAGCCGG TCGGCGAACG GCGGGCGGTC GGCGGCCTCG CCCTCCCCAC CCTGCCGTCC
CCGGACTCCG CGGTGACCGG GCAGGCCGGT GACGGGCCCG GCCGGCCGGA GCGGGGCGAG
CGCGCGCGGC CGCGCGACGG GCATCGGGCC GGTGGCCCCG GCGGTGCCCC GGACGGGCTT
CCGGCGGGCG AGGCGGGCTC CGGGCCCCGG CGCGGCACGG GCGCGCCCGC GGGCTCACGG
GCATCGGACG CTTCCGCCCG GCCGCAGCCC GGCGCCGGCG GCCTGCCGGT GCGGCGGCCG
CTCGCCGCGC GGGATCCCGG CCCGGCGCCG TCCGCCGCGG GGGTTCCCGA TCCGGCGCCG
GCCGGCGCGG ATCACCCGGT CCGCCTGACG CGGCGGCCCG ACCTCGGCAT CACCGTCCAG
CCGCTCGGCG CGCTCGTGCG CGGCCGATCC GGCATCGTCG CGCTCGGCGC CCGCAACACC
GGCACGGCCC GCACCGAGCG GGTGGTGGCG ACCGTGCTGC TCCCGCCCGG GGTCCGGTTC
CGCGGCCTGG TGGCCCCGGA GCGTCCGGGG GCGGGCCGGC CCTGGTCCTG CCGGGACGCG
GCACGGGCCG TGCGGTGCAC CCGCCCCGGG CTCGCCGCCG GGGCATCGGC CACCGCCTTT
CTGCGGGTGA AGGTGGCCGA GGGCGCGCCC CTGGGCCGCC CGGTGCGGGC ATGGGCGCGC
TCGGGGGAGC GGATCGCGTT CGCGACCTCC TCGTCCGGGG TGCGCGCCAT GGGGGTCCCG
GCCCGCTTCG CCGCGGAGGG CCGGCTCCTC ACCCAGGTGA TCGGCGGCGT CCTGTTCGGC
CCGCCCGGGG ACGCGCCCAC CGGCGTCCCG GCGACCGTTC CCGGCGGCCC GGAGGCCAAC
GCCGAGAGCG GCGCCCGGCT CACCCTCCCG GCCCGCGGCC GGGTGCTCTG GGCCGGCCTC
TACTGGTCCG CCGCCGGCCA CGGCCGGCTG CAGGCCGGTG AGGTCCTGGT GCGCGCGCCG
GGCGCCCGGG GCCCGGTGAC CGTGCGCCCG GCGTCGGTGA TCCGCCGTGA CCTGCCCGGA
CTGTCCGGCT ACCAGGCGTT CGCCGAGGTC ACCGGCCTGG TCCGGGCGCA CGGGAGCGGC
CAGTGGGCGG TGGCCGGCGC CTCCGCCGCC CTCCGGCCGG GCGGCCCCGG CGTGCTGCGG
TGGGCGCGGT GGACCCTCGT GGTGGTCGCG GCCGATCCGC GCCAGCCGTT CGGCCGGGTG
ATGGTGCTCG ACACCGCCGA GGTCGTCGAC GACCGGGGAC GGCTGAACGT CCCGCTCACC
GGGCTCGCGC CCGCCGCGTC CCCGGTGCGG ATCGACCTCG CCGTGTGGAC CGGCGAGCGG
GACGGCTCGG CCGCGCTGCG GGACCGGTCA CGGCGGGGTG CATCGGCCCG GGGGGACGGC
CAGGGTTCTG ACGTCTCGCT CGCCACCGCC CGGCCGCTGC GCGGGCTGCT CGGGCAGCGG
CCGGTGCTCA CCCTGACCGG TGTGCGTGAC ACGCTGCTGT TCGGGGTGGC CGCGGTCAGC
GCGCACCACT GGTCATGA
 
Protein sequence
MRRKNRQSDE ELLDAVRRGD TSAYGMLYQR HVLPARALAR RLVRGDEEVE DVLVETFAGV 
LEIIRRGGGP GSAFRPFLLA SLRRYAAAGE VDLTDPDACY VDPELAGLEQ APLARAYRSL
PERWRAVLWH IEVEGATPAE TAPLLGMSAR RTARFAREAR GALREAYLAL HESDAHDEAC
RPVLALLLRH VEGLLPKREA RTVDQHIAGC IECRSVFLEL TDVTQGLRMI VGPLYAGPAA
EDYLSDLRRV RQEARRGPVR GVLLPLARLL PGLWRRLPPA QRAAAAGAAL LLSAVTVILS
AEPVGERRAV GGLALPTLPS PDSAVTGQAG DGPGRPERGE RARPRDGHRA GGPGGAPDGL
PAGEAGSGPR RGTGAPAGSR ASDASARPQP GAGGLPVRRP LAARDPGPAP SAAGVPDPAP
AGADHPVRLT RRPDLGITVQ PLGALVRGRS GIVALGARNT GTARTERVVA TVLLPPGVRF
RGLVAPERPG AGRPWSCRDA ARAVRCTRPG LAAGASATAF LRVKVAEGAP LGRPVRAWAR
SGERIAFATS SSGVRAMGVP ARFAAEGRLL TQVIGGVLFG PPGDAPTGVP ATVPGGPEAN
AESGARLTLP ARGRVLWAGL YWSAAGHGRL QAGEVLVRAP GARGPVTVRP ASVIRRDLPG
LSGYQAFAEV TGLVRAHGSG QWAVAGASAA LRPGGPGVLR WARWTLVVVA ADPRQPFGRV
MVLDTAEVVD DRGRLNVPLT GLAPAASPVR IDLAVWTGER DGSAALRDRS RRGASARGDG
QGSDVSLATA RPLRGLLGQR PVLTLTGVRD TLLFGVAAVS AHHWS