Gene Tbis_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0125 
Symbol 
ID9166599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp142512 
End bp143750 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content76% 
IMG OID 
ProductXRE family transcriptional regulator 
Protein accessionYP_003650751 
Protein GI296268119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.49068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.97143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACC TTCCCGCATG GGCGGACCGG ATCCGGCGCG AGCGGCGTAA CCGGGGCTGG 
TCCCAGAAGG AGCTGGCCAA GCGGCTCGCC GAGGTGGCCG CGAGGCTCGG CGTCCCCATG
CCCGAACGCG CATCGCTCAT CCGCTCGATC CGGAACTGGG AGGCGGGCCG CTGCCGGCCG
CGGGACCCCT ACCCGATGCT GCTGGCGCGC GTGCTCGGCC TCGGTGAGGA GGAATTGTTC
GCCGGATCGT GGCAGCCGTA CCGGCCGGCC CCGGGCGAGG TGCTCGACGG CCTGCTCCCC
GAGGGCGACC CCGTGGGCGT GCTCCAGGCC GGGCGGCGGA TCGGCCCGGG GATCGTGGCC
CACCTCGCCG CCCGCGTGCA CGGCCTGCGC CGCTCCGATG ACGTGCTCGG CGGGGGTGAC
CTGATCGGCC CGGTGTTCCG GGAGCTCGGC GGCATCGTGC GGCTGTACCG GGAGGGCAGC
CACGATGCGC GTACGGGCCG CGCGCTGCTC ACCGTCATCG GCGAGTGCGC CCAGATCGCC
GGCTGGGTCG CCAGCGACGC CGGTCGGCAT GACACGGCGG CGCGGACCTA CCGGCTCGGC
ATCAGCGCCG CGCGCCAGGC CGGCGACCGC ACGCTGGAGT CCCACCTGCT CGGCTCGCTG
GGCTATCAGG AGGTCAACCG CGGCCGCCTG CGCGAGGGCA CCGAGCTGAC CCGGAGCGCG
GTGCGAGTGC TCGACCGGCG CTCGCCCGCC CGCGCCCGGG CCCTGGCCTG GGACCGGCTG
GCCTGGGCGC ACGCCCGGAC CGGGAACGCG CAAGCGGCCA TGCGCGCCCT GGGCGAGGCC
GGGGACGCGC TCGCCGGCGA CGACGGCGGC GAGACGCCCG CCTACCTCTA TTGGGTGAAC
CCCGCGGAGC TGCAGATCAT GGAGGCCCGG GTGTACACCG AGCTCCGCAG GCCGCTGCGT
GCCGTGCCGC TGCTGACCGA GGTGCTCGAC CGGTACGACT CCACGCACGC CCGTGAGCTC
GGGCTCTACC TCTCCTGGCT GGCCGTCGCC CTCGTGGACG CCAACGAACC GGAGGAGGCG
GCGCGCACCG CCCGGCGGAT GCTCGAGGTC TCCGCCGGGG TGGCGAGCGC GCGGACCGCC
GAACGTGCCC GGGTGGTCCT CCGCCGTCTG CAGCCCTACC GGGACCTGCC CGAGGTGCGG
GACGTGCTCT CCGTCGCCGG GGACGCTCTT CAGGGCTGA
 
Protein sequence
MEDLPAWADR IRRERRNRGW SQKELAKRLA EVAARLGVPM PERASLIRSI RNWEAGRCRP 
RDPYPMLLAR VLGLGEEELF AGSWQPYRPA PGEVLDGLLP EGDPVGVLQA GRRIGPGIVA
HLAARVHGLR RSDDVLGGGD LIGPVFRELG GIVRLYREGS HDARTGRALL TVIGECAQIA
GWVASDAGRH DTAARTYRLG ISAARQAGDR TLESHLLGSL GYQEVNRGRL REGTELTRSA
VRVLDRRSPA RARALAWDRL AWAHARTGNA QAAMRALGEA GDALAGDDGG ETPAYLYWVN
PAELQIMEAR VYTELRRPLR AVPLLTEVLD RYDSTHAREL GLYLSWLAVA LVDANEPEEA
ARTARRMLEV SAGVASARTA ERARVVLRRL QPYRDLPEVR DVLSVAGDAL QG