| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_0003 |
|---|
| Symbol | |
|---|
| ID | 9166472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | + |
|---|
| Start bp | 3637 |
|---|
| End bp | 4581 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | 6-phosphogluconate dehydrogenase |
|---|
| Protein accession | YP_003650633 |
|---|
| Protein GI | 296268001 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00950431 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCG GCATGGTCGG GCTCGGCAAG ATGGGCGGGA ACATGGCCGA GCGGCTCCGC
CGCGGCGGGC ACGAGGTGGT CGGCTACGAC CGCAACCCCG CGATCAGCGA CGTCGGCAGC
CTCCGCGAGC TCGTCGACCG GCTTCAGGCG CCCCGCACCG TCTGGGTGAT GGTCCCGGCC
GGTGACCCGA CCAGGACGAC GATCGAGCGC CTCGGCGAGC TGCTCTCGGC CGGCGACCTC
GTGGTCGACG GCGGCAACTC GCACTACCGG GACGACCAGG TGCACGCGGA CCGGCTCGGC
GCCCGCGGGA TCGGGTTCGT CGACGTGGGC GTCAGCGGCG GGGTCTGGGG GCTGCGCGAG
GGCTACGCGC TCATGGCCGG AGGCGCCCCC GAGCACATCG AGCGCCTCAT GCCGATCTTC
ACGACCCTCA AGCCGCCGGG GGAGGACGGG TTCGTCCACG CGGGCAAGGT GGGCGCGGGC
CACTTCGTGA AGATGGTCCA CAACGGCATC GAATACGGCA TGATGCAGTC CCTCGCCGAG
GGGTGGGAGC TCCTCGAGGC GAGCGATCTC GTCACCGACG TCCTCGCCAC CTTCCGGAGC
TGGCGCAGCG GGACCGTGAT CCGCTCCTGG CTGCTGGAGC TGCTCGTCCG CGCGCTCGAG
GAGGACCCGC ACCTGTCCGA GCTGAAGGGC TACGCGGAGG ACTCCGGCGA GGGCAGGTGG
ACGGTGCAGG CCGCGGTCGA GCACGCGGTG CCCCTCCCGG CCATCACCGC GGCGCTGTAC
GCCCGGTTCA CCTCCCGCCA GGCCGACTCC CCCGCGATGA AGATGATCGC GGCGCTGCGC
AACCAGTTCG GCGGTCATCC GGTCGCCTCG GCCGAGGGCC AGACCGGCAA GGGGGCCGAC
TCCCCCGGCG CGGACGTCAT CCCACCGGCC GAGGCCGAGC GCTGA
|
|---|
| Protein sequence | MQIGMVGLGK MGGNMAERLR RGGHEVVGYD RNPAISDVGS LRELVDRLQA PRTVWVMVPA
GDPTRTTIER LGELLSAGDL VVDGGNSHYR DDQVHADRLG ARGIGFVDVG VSGGVWGLRE
GYALMAGGAP EHIERLMPIF TTLKPPGEDG FVHAGKVGAG HFVKMVHNGI EYGMMQSLAE
GWELLEASDL VTDVLATFRS WRSGTVIRSW LLELLVRALE EDPHLSELKG YAEDSGEGRW
TVQAAVEHAV PLPAITAALY ARFTSRQADS PAMKMIAALR NQFGGHPVAS AEGQTGKGAD
SPGADVIPPA EAER
|
|---|
| |