Gene Tpau_4269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4269 
Symbol 
ID9158456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014159 
Strand
Start bp19904 
End bp21115 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content66% 
IMG OID 
Producttransposase IS111A/IS1328/IS1533 
Protein accessionYP_003649174 
Protein GI296141932 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGTC CGGATCGATG GTGGGTGGGA GTTGACGTCG GCAAGGAGTT CCACTGGGTC 
GCGGTCTGTG ATGACGCCGG CAAGGTGGTC TCCTCCCGCA AGGTGGTCAA CGACGAAGCT
GCGATCGCCA CGGTGATCGC CGAGGTTGAT GGCCGCGGCG GAACGGTGTC GTGGACTGTG
GACTTGATCA GCCCCTATGC GACGTTGTTG TTGACGATGC TCGCCGCCGC AGGGCACTCG
GTGCGGTACC TGACCGGCCG CGCGGTGTGG CAGGCATCGG TGGTTTACCG CGGCGGCGAA
GCGAAGAGCG ATGCCAAAGA CGCCCGCGTC ATCGCTGATC AGGGACGGAT GCGTGGTGAT
GATCTGCCAC TGCTGACTCC GGCTGATGGC CTGGTCACGG AGCTGGCGAT GCTCACCGCC
CACCGGTCGG ATTTGGTCGC GGACCGCACC CGCACGATCA ACCGGCTGCG TCAGCAGCTG
GTCTCGGTAA GTCCCGCGCT CGAGCGCGCC GCGGAACCGA CTGCCGACCG TGGCTGGGTG
AGGCTGCTGG CCCGCTACCA GCGCCCGAAA GTGCTGCGCC GAACTGGTGT CGTAAGGCTG
ACCCGCATGC TCTCCGACGC TGGTGTGCGT AACGCCGGCA AGATCGCCGA AGCTGCAGTC
GAGGCGGCGA AAGCGCAAAC CGTGGCACTG CCCGGGGAGG ATGTCGCCGC CGCGCTGGTT
GCTGAGCTCG CGCAGGGGGT GATCGACCTC GATACGCGGA TTAAGAACGT CGATGCCGCC
ATCGAGGAGC GATTTCGCCG ACACCCTCTG GCCGAAGCGA TCGTGAGCCT GCCCGGCATG
GGCTTTCGTC TCGGTGCTGA ATTCCTCGCT GCCGTCGGAG ATCCCAGCCG AATCGTCTCC
GCTGATCACC TCGCGGCGTG GGCCGGCCTG GCCCCGGTTT CCAAGGACTC CGGCAAGCGC
ACCGGCAGGC TGTGCACCCC CAAGCGCTAT CACCGCGGAC TGCGACGAGT GATGTACATG
TCCGCGGTCA CCGCCACCCG CTGCGACCCC GAATCCCGGG CCTACTACCA ACGCAAACGG
TCCCAGGGAA AGAAACACAT TCCCGCGACG ATCTGCCTGG CCCGAAAGCG CGTCAACGTT
CTCTACGCCC TCATCCGCGA CAACCGCACC TGGCAGCCCA CCGCACCGCA AATCACGGCC
TCGGCTGCTT GA
 
Protein sequence
MAGPDRWWVG VDVGKEFHWV AVCDDAGKVV SSRKVVNDEA AIATVIAEVD GRGGTVSWTV 
DLISPYATLL LTMLAAAGHS VRYLTGRAVW QASVVYRGGE AKSDAKDARV IADQGRMRGD
DLPLLTPADG LVTELAMLTA HRSDLVADRT RTINRLRQQL VSVSPALERA AEPTADRGWV
RLLARYQRPK VLRRTGVVRL TRMLSDAGVR NAGKIAEAAV EAAKAQTVAL PGEDVAAALV
AELAQGVIDL DTRIKNVDAA IEERFRRHPL AEAIVSLPGM GFRLGAEFLA AVGDPSRIVS
ADHLAAWAGL APVSKDSGKR TGRLCTPKRY HRGLRRVMYM SAVTATRCDP ESRAYYQRKR
SQGKKHIPAT ICLARKRVNV LYALIRDNRT WQPTAPQITA SAA