| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_4256 |
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| Symbol | |
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| ID | 9158445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014159 |
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| Strand | + |
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| Start bp | 9354 |
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| End bp | 12434 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | TrwC relaxase |
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| Protein accession | YP_003649163 |
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| Protein GI | 296141921 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGATGA CGATGCACGT CCTGCACGCT GGGGACGGCT ACACCTACCT CACCCGCAGC
GTTGCGAGCG CCGATCAGCA GCGCGGCCGC GGCACCTCCC TATCGGACTA CTACGCCGCC
AACGGCACCC CGCCCGGCCA GTGGACCGGC CGCGGACTGG CCGACCTCAC CGCGTTCGGC
AGCCCGGAGG GCGAGAGCGG CCTGGTGGGC GGCGCGGTCA CCGAGGCGCA GATGCGCGCC
CTGTTCGGTG AGGGCCTGCA CCCGAACGCG GACCAGCTCA TCGACGCCGG CGCCGACGTC
GGCGATACCC GGCTCGGGCG GCGGTTCCCG CTCTACGCCA ACGCACCGAG CCCGTTCCTC
AAGGACTTCG CCGCCGCTAC CAAGGCGTTC GAGGCAGGGC AGCAGCGCCG CCCGGACGCC
GCCGAACGCG ACCAGATGTG GATGCGCGCT GCCCGCGAGC ACTACGAGCT CGCGCACCCG
AACAAGGTCG ATCCGAGCGA GCAAGCGGTG CGGGCGTGGG CGGGTCGGCA GCGCGCCGCC
ACCCGCCAGC CCGTCGCCGG ATACGACCTG ACGTTCACCC CGGTCAAGTC CGTGTCGGTG
CTGTGGTCCC TCGGCGATGA GGACACCCGA CGCACCATCG AGGCGTGCCA CCGGGAGGCC
GCGGACGAGT CGATCCGCTA CCTGGAAGAC AACGCTCTGG TGACCCGCCG CGGCGGCAAG
GGCGAGGCGC AGATCGACGC CGGCGGGCTC GTCATCGCTG CTTTTGATCA CTACGACAAC
CGCGACGGCG AGCCGAACCT GCACACCCAC TACGCGGTGT CGAACAAGGT TCTCGGCTCT
GATGGCCGGT GGTCGAGCAT CGACGGCACG CCGTGGTTCA AGGCCGCATC GACCGCCTCC
GCCCGCTACA ACGCCGCCCT GGCCGACAAG CTCACCGACC GTCTCGGCGT CGAGTTCCGG
TCCCGGTCCA AGGGCGCGGA CAAGGAGCCG GTCCTGGAAA TCGCGGGAAT CACCGACACT
CGTATCGCTT CGCACGCCGG CCGCACGGCG ACCATCGAGC AGCGTTACGC CGAACTCGAA
GCCGACTACA TCGACCGGCA CCAACGCGCC CCCGGGCGCG CGGCTCGCTA CCAGCTGCGG
CAGAAGGCGA ACCTGGACAC CCGCCGCGCC AAGGCCGCCC TGGCAACAGG TTCCGCGGCC
GACCGGGGCG ACGGCGCCGC CGTCGTGCAC GGCCTCGGCG CAACTCTAGA GCGTGCCCGC
AAGGTCGATG TCGCCGCGCA CCCGGACGCC GCCCGCGGCC GAGCTCTGCT CGAACACTGC
CAGGCCGAAG CCGCCCGACT CACCGATTTC CGCGCCGACA CCGCGCGGCT TTCGGTCGAC
GAGCTCGCCG ACCTCACCAC CGCCAAACTC GAGCAACGGT TCAACAGCTG GTCCCCCACC
ACCGTCACCC GGTGGGCCAC CATCGTCGTC GCGCAGCAGG CCACCGAGGG CACACTTCCC
GATGGTGTTG CCCGCGCCGA TCTCATCGAG CAGGTCACCG CGGCGGTCAC CAGGGACAGC
CTGCGGATCG ACGCCGTCCA TCCCGTCCTC GACACCAGCA CCGGCCTGAT ACCGGAGGCC
ATGCAGCGCC GCAACGGCGA GCACATCCTC ACCCCGGTCG GCTCCACACT GCTCACCTCC
ACCCGTGTCG TCGAGTCCGA GCACAACCTG ATCCTGGCCT CCGAGACCGT CACCAGCACC
GTCGCCACCG ACGCCGCAGT CAAGGCCGCG ATCGCCGCGG TGGGCGAGGA AACCGGCTTC
GCCCTCAACG AAGGACAGGC CCGCCTCGTC GAGCACTTCT GCTCCTCCGG CGCACTACTC
GCCGTCGGTG TCGGCCCTGC CGGCACCGGC AAGACGACGT CGATGAAGGC GACGATCGCC
GCGTGGGAGA ACACCACCGG CCTGCCGCAA TCCGTGCAAG GCCGCAAGGT CATCGCCCTC
GCGCCGTCCG CTGCCGCCGC TATGAAGCTC GGCGACGAAC TGGGTATGGG AACTAGCGGT
GACCCCGCCG ATGCCGCCCG CACCATCGAC ACCGAGGTGG TGTTCTTCAC CGCGAACATG
AAGGCGCTCG CTGCCGCCCG CGAGGCCGGT GACACCACGC AAGTCAAGAG GCTCCGTGAG
CGCATGACCC GCCGCATCCC CCGCGGGTCG ATGCTGCTCG TCGACGAAGC GGGCATGGCA
TCCACGGCCA ATCTCCACGA AATCCTCCGG ATCGCCAAAG CCACTGGCTC CGTCGTCCGC
CTCCTCGGCG ATCCCCTCCA GCTCGACGCC GTCGACCGCG GCGGCGCACT GGAACTGCTC
GCCAAACACA CCGACGCGCC CACCCTCACG AAGGTCGTGC GGTTCGTCCA GTCCGAACGC
GCCGCCGACG GCACCCTCGC CGCAGCCACC ACACAGGTTG TGGAAGACGG TGTGGAGAAG
ACCGTTAAGA AGGGGCTCGA CACGATCGCC GCCGAGAACA GTCTGCGGAT GCGCGACGGT
CACCACGACA GCCTCACCAT GTTCGACGAG CGCGGCTGGA CCCACCATCA CAGCGCCAAA
GAAGCAGCGC TCACCGATGT CGTCGCCGCC CACCTCGCCG ATCAGCAACG CGGATCCAAC
GCGATGGTTG TCGCCACCAC CCGCGCCGAT GTCAAGACCC TCAACGAGAT GCTGCAAGCC
CACCACCGCG AGACCGGGAC CGACCGCACC GACCGCACCG TCAGCCTCTC CGACGGCCTG
ACCGCCGGCC GCGGCGACAT CATCGTCACC CGCGACAACA TCAAGATCAA ACGCCGCGGC
GGCAGCCACG ACCGCATGCC GATCGCCAAC GGCGAACTGT GGACGGTCGA AAAGATCGAC
CGAGACGGCG GCATCACCGC CCGCAACATC GACGACGGTG GACGCATCGA ACTGCCCGCC
GACTACCTGC GCGCAAACAC CGAACTCGGC TACGCACTGA CCATCCACCG CTCACAGGGG
GCCACCGTCG ACACCTTGAA CCCGCCGGTC GGGTTGACGG TATCGAGGCG CAGGCCCAGT
AGCGGAGCGA GCGCTCGGTA G
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| Protein sequence | MVMTMHVLHA GDGYTYLTRS VASADQQRGR GTSLSDYYAA NGTPPGQWTG RGLADLTAFG
SPEGESGLVG GAVTEAQMRA LFGEGLHPNA DQLIDAGADV GDTRLGRRFP LYANAPSPFL
KDFAAATKAF EAGQQRRPDA AERDQMWMRA AREHYELAHP NKVDPSEQAV RAWAGRQRAA
TRQPVAGYDL TFTPVKSVSV LWSLGDEDTR RTIEACHREA ADESIRYLED NALVTRRGGK
GEAQIDAGGL VIAAFDHYDN RDGEPNLHTH YAVSNKVLGS DGRWSSIDGT PWFKAASTAS
ARYNAALADK LTDRLGVEFR SRSKGADKEP VLEIAGITDT RIASHAGRTA TIEQRYAELE
ADYIDRHQRA PGRAARYQLR QKANLDTRRA KAALATGSAA DRGDGAAVVH GLGATLERAR
KVDVAAHPDA ARGRALLEHC QAEAARLTDF RADTARLSVD ELADLTTAKL EQRFNSWSPT
TVTRWATIVV AQQATEGTLP DGVARADLIE QVTAAVTRDS LRIDAVHPVL DTSTGLIPEA
MQRRNGEHIL TPVGSTLLTS TRVVESEHNL ILASETVTST VATDAAVKAA IAAVGEETGF
ALNEGQARLV EHFCSSGALL AVGVGPAGTG KTTSMKATIA AWENTTGLPQ SVQGRKVIAL
APSAAAAMKL GDELGMGTSG DPADAARTID TEVVFFTANM KALAAAREAG DTTQVKRLRE
RMTRRIPRGS MLLVDEAGMA STANLHEILR IAKATGSVVR LLGDPLQLDA VDRGGALELL
AKHTDAPTLT KVVRFVQSER AADGTLAAAT TQVVEDGVEK TVKKGLDTIA AENSLRMRDG
HHDSLTMFDE RGWTHHHSAK EAALTDVVAA HLADQQRGSN AMVVATTRAD VKTLNEMLQA
HHRETGTDRT DRTVSLSDGL TAGRGDIIVT RDNIKIKRRG GSHDRMPIAN GELWTVEKID
RDGGITARNI DDGGRIELPA DYLRANTELG YALTIHRSQG ATVDTLNPPV GLTVSRRRPS
SGASAR
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