Gene Tpau_4246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4246 
Symbol 
ID9158435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014159 
Strand- 
Start bp2563 
End bp3234 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003649153 
Protein GI296141911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.120541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACA CCAAGCGACG CGCGACCGCA CTCATTGCAG CAACATGCAT CGCGGGGGCG 
GCTGTGACAG CTGCGCCTGC TCTAGCCCAG CCTGTTTCAA GCCCTCTACC CGCCAGTCCA 
GCGGCTACCG GCGGAACAGG CGGCGAAGAA ATCTTCCGCG CGGTGCTCCT TGGAGAGGGC 
CCCCTGGCAC AGAAACTGGC CGCCAGCAAT CCGGAACTGC TGTCGAAGTT GGCTTCAGCC 
TACCCGCAGA ACAATACTCC TCAAGCGCTG GCTGCTGGCA ATCTGATCGT CGACAAGATC 
AATGCTAAGA ACCCTGGCTA TTTCGCACAA TTCAAGAGCG CTACCACCAG CGGTGACCCC 
TACGCGGTCG AAGCAGCAAT CAATGACGGT CCCGTACAGA TCCGCAGCGC TGGAATAACC 
ACAAAAGAGA TCGAAACTGA AGCGCCGGAA TGCGGAGTCT TTCCCTTTGT CGCACTGGCA 
GTATTCCACG TCGCTGCCGC GGTAACAACC GTAGGGGGAG CGGTCTTTGA GCTGGCAGCT 
GTGGCGGCTA ACGCAGTGTA CGCCCAGAAT GTCTTGTGGC CTAATGCAGA GCGCGCGAAC 
GGGACAGCTT CCAGCCTAGA TCGAGATCGA TTCATGGGGC AGCTCACGAA ATCGCTGCAA 
AACGTTGGAT AG
 
Protein sequence
MNNTKRRATA LIAATCIAGA AVTAAPALAQ PVSSPLPASP AATGGTGGEE IFRAVLLGEG 
PLAQKLAASN PELLSKLASA YPQNNTPQAL AAGNLIVDKI NAKNPGYFAQ FKSATTSGDP 
YAVEAAINDG PVQIRSAGIT TKEIETEAPE CGVFPFVALA VFHVAAAVTT VGGAVFELAA 
VAANAVYAQN VLWPNAERAN GTASSLDRDR FMGQLTKSLQ NVG