| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_R0028 |
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| Symbol | |
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| ID | 9156546 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 2479948 |
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| End bp | 2483034 |
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| Gene Length | 3087 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00806626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTAAGTGTCT AAGGGCGCAC GGTGGATGCC TTGGCGCAAG GAGCCGATGA AGGACGTGGG
AGGCTGCGAT ATGCCTCGGG GAGCTGTCAA CCGAGCTGTG ATCCGAGGAT TTCCGAATGG
GGAAACCCAG CACCAGTCAT GTGGTGTTAC CTGCCGCTGA ATATATAGGC GGTGTGGAGG
GAACGAGGGG AAGTGAAACA TCTCAGTACC CTCAGGAAGA GAAAACAATA GTGATTCCGT
GAGTAGTGGC GAGCGAAAGC GGATGAGGCT AAACCATGCA CATGTGATAC CGGGTAGGGG
TTGTGTGTGT GGTGTTGTGG GGTTCATCGT TTCAGTTCTA CCTGGCTGGA CGACAGTAAG
AAATCATCAT GTTAGGTGAA GTGGCCTGGA ATGGTCTGCC GGAGAGGGTG AGAGTCCTGT
AACCGAAAAC GTGGTGACTG TTGTGATGGA TTCCCGAGTA GCAGCGGGCC CGTGAAATCC
GCTGTGAATC TGCCGAGACC ACTCGGTAAG CCTAAATACT ACCTTGCGAC CGATAGCGGA
CTAGTACCGT GAGGGAAAGG TGAAAAGTAC CCCGGGAGGG GAGTGAAATA GTACCTGAAA
CCGTGTGCTT ACAATCCGTC AGAGCCCTCG TTGTGGGGTG ATGGCGTGCC TTTTGAAGAA
TGAGCCTGCG AGTCAGTGCT CGGTGGCGAG GTTAACCCGT TGTGGGGTAG CCGTAGCGAA
AGCGAGTCCG AATAGGGCGT GTGAGTCGCC GGGTCTGGAC CCGAAGCGGA GTGATCTACC
CATGGCCAGG GTGAAGCAGC AGTAAGATGT TGTGGAGGCC CGAACCCACT TAGGTTGAAA
ACTGAGGGGA TGAGCTGTGG GTAGGGGTGA AAGGCCAATC AAACTCCGTG ATAGCTGGTT
CTCCCCGAAA TGCATTTAGG TGCAGCGTCA CGTGTTTCTT GCCGGAGGTA GAGCTACTGG
ATGGCCGATG GGCCCTCACA GGTTACTGAC GTCAGCCAAA CTCCGAATGC CGGTAAGTGA
GAACGTGGCA GTGAGACTGC GGGGGATAAG CTTCGTAGTC GAGAGGGAAA CAGCCCAGAT
CGCCGGCTAA GGCCCCTAAG CGTGTACTAA GTGGAAAAGG ATGTCCGGTC GCGAAGACAA
CCAGGAGGTT GGCTTAGAAG CAGCCACCCT TGAAAGAGTG CGTAATAGCT CACTGGTCTA
GTGGCTGGGC GCCGACAATG TAGCGGGGCT CAAGTACACC GCCGAAGCCG CGGCACTCAC
AGTTTTGACT GTGGGTGGGT AGGGGAGCGT CGTGCAGCCG TAGAAGCAGC AGGGTGACCT
AGTTGTGGAG GCTGCGCGAG TGAGAATGCA GGCATGAGTA GCGAATGACA AGTGAGAAAC
TTGTCCTCCG GATGACCAAG GGTTCCTGGG CTAGGTTAAT CCTCCCAGGG TGAGTCGGGA
CCTAAGGCGA GGCCGACAGG CGTAGTCGAT GGACAACGGG TTGATATTCC CGTACCCGTG
TCAGATCGCC CCTGATGAAT CAGTTGTACT AACCGTCCTG AAGCACCTTG ATCACCTTCG
GGTGACGGTG GTGTGGATGC ACGGGACCTC GGCTGGTAGT AGTCAAGCGA TGGGGTGACG
CAGGAAGGTA GTGGGGCCAG TCAGTGGTTG TACTGGTGTA AGCCTGTAGG GCGAGATCTA
GGCAAATCCG GATCTCATGA TGCCTGAGAG GTGATGCGTA GCCGTTGCGG CGAATTCCAT
GATCCTATGC TGCCGAGAAA AGCCTCTAGC GAGATCTGAT GTGGCCCGTA CCCCAAACCA
ACACAGGTGG TCAGGTAGAG AATACCAAGG AGATCGAGAG AACTGTGGTT AAGGAACTCG
GCAAAATGCC CCCGTAACTT CGGGAGAAGG GGGACCTCGT CTGGTGATGA TCTTTACGGT
CGGAGCTGGG TGGGGTCGCA GAGACCAGAG AGAAGCGACT GTTTACTAAA AACACAGGTC
CATGCGAAGT CGTAAGACGA TGTATATGGA CTGACGCCTG CCCGGTGCTG GAAGGTTAAG
AGGACCGGTT AGCCGTAAGG CGAAGCTGAG AATTTAAGCC CCAGTAAACG GCGGTGGTAA
CTATAACCAT CCTAAGGTAG CGAAATTCCT TGTCGGGTAA GTTCCGACCT GCACGAATGG
CGTAACGACT TCTCTGCTGT CTCAACCACA GACTCGGCGA AATTGCAGTA CGAGTAAAGA
TGCTCGTTAC GCGCGGCAGG ACGAAAAGAC CCCGGGACCT TCACTATAGC TTGGTATTGG
TGTTCGGTTC GGTTTGTGTA GGATAGGTGG GAGACTGTGA AGCGGGCACG CCAGTGTTCG
TGGAGTCGTT GTTGAAATAC CACTCTGATC GTATTGGATA CCTTAACCTC GGACCATGAT
CTGGTTCAGG GACAGTGCCT GGTGGGTAGT TTAACTGGGG CGGTTGCCTC CCAAAATGTA
ACGGAGGCGC CCAAAGGTTC CCTCAGCCTG GTTGGCAATC AGGTGTTGAG TGCAAGTGCA
CAAGGGAGCT TGACTGTGAG ACTGACAGGT CGAGCAGGGA CGAAAGTCGG GACTAGTGAT
CCGGCACCGG CAAGTGGAAG CGGTGTCGCT CAACGGATAA AAGGTACCCC GGGGATAACA
GGCTGATCTT CCCCAAGAGT CCATATCGAC GGGATGGTTT GGCACCTCGA TGTCGGCTCG
TCGCATCCTG GGGCTGGAGT AGGTCCCAAG GGTTGGGCTG TTCGCCCATT AAAGCGGCAC
GCGAGCTGGG TTTAGAACGT CGTGAGACAG TTCGGTCTCT ATCCGCCGCG CGCGTTAGAA
ACTTGAGGAA GGCTGTCCCT AGTACGAGAG GACCGGGACG GACGAACCTC TGGTGTGCCA
GTTGTTCCAC CAGGAGCACG GCTGGTTGGC TACGTTCGGA AGGGATAACC GCTGAAAGCA
TCTAAGCGGG AAGCCTGTTC CAAGATTAGG TTTCTCACCA CCTTGAGTGG GTAAGACCCC
CTACAGACTA TGGGGTTGAT AGGCCAGAAC TGGAAGCGCA GTAATGCGTG CAGGTGACTG
GTACTAATCG GTCGAGGACT TACCACA
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| Protein sequence | |
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