| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_4240 |
|---|
| Symbol | |
|---|
| ID | 9158428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 4377327 |
|---|
| End bp | 4378499 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | membrane protein insertase, YidC/Oxa1 family |
|---|
| Protein accession | YP_003649147 |
|---|
| Protein GI | 296141904 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.148163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCAATC CCTTATCACT GGACTACGTG TATTACCCGG TCTCGGGCAT CATGTGGGTC
TGGCACAAGC TCTTCTCCCT GATTCCCGGC CTCGGCCCGG ATAGCGGTGT CACCTGGGCC
CTCTCGGTGA TCTTCCTGGT GCTTACCCTG CGCGCCATCC TGTACAAGCC GTTCGTCCGG
CAGATCAGGA CCACCCGGCA GATGCAGGAG TTCCAGCCGC AGATGCAGGC GCTGCGGAAG
AAGTACGGCA AGGACCGGCA GAAGCTGGCC CTGGAGATGC AGAAGCTGCA GAAGGAACAC
GGCTTCAACC CTCTGCTGGG CTGTCTGCCT GCGCTGCTTC AGGTTCCGGT GTTCATCGGC
CTGTTCCACG TGCTCCGCTC GTTCAACCGG ATGGCCGGCG GCGCCACCCA GATGTTCGGC
TCGCCGGATA TGACGGCGTA CGAGACGCGG CACACCGCGA ACTACTTCTT CTCCGCCACC
GACGTGCAGA GCTTCCTGGA CGCACGTCTG TTCGGCGTAC CGCTCTCGTC CTACGTGCAG
GAGCCGGTGG CACAGTTCCA GGCGTTCATG CCGGTCAACA TCAACAACGA TTACATCGCG
CCGAACTTCG AGAAGTGGCA GATCCTGGCG CTGTCGGTGC CGCTGATGAT CGTTGCGGCG
CTGGCCACTC ACTTCAACGC CCGTGCCTCC ATCGCGCGCC AGCCCGTCGC CTCGCTGGAC
AACCCGCAGA CGGCCATCAT GAACCGCCTC ATGCTGTGGG TCTTCCCCAT CGGTGTGCTC
GTCGGTGGCT TCTTCCTACC GGTCGCGATC CTGATCTACT GGGTCACCCA GAACATCTGG
ACGTATTGCC AGCAGCACAT CGTCTTCGGA AAGTTGGACA AGGAAGACGA GGAGAAGAAG
CGGCTCGCGC AGGAGAAGCG CGCGGAGAAC GCGCCCAAGC CCGGTGCCAA GCCGAAGAAG
GGTGCCGCGC AAGCCGCGAA GCTTGCCGAG GCCGCGACGG ACGCCGATGG CGACGATGCC
GACGCTGAGC AGGCACCGTC GAAGCCCTCC ACCGGTGCGA AGCCGGCCGC CGGTGCGAAG
CCGGCTGCGG GTGCGAAGCC CAAGCAGCAG CACCCCTCCG GTAATGCACG CCAGCGGCAG
CGCAATCAGC AACAGCGCAA GAAGCGGCGC TGA
|
|---|
| Protein sequence | MFNPLSLDYV YYPVSGIMWV WHKLFSLIPG LGPDSGVTWA LSVIFLVLTL RAILYKPFVR
QIRTTRQMQE FQPQMQALRK KYGKDRQKLA LEMQKLQKEH GFNPLLGCLP ALLQVPVFIG
LFHVLRSFNR MAGGATQMFG SPDMTAYETR HTANYFFSAT DVQSFLDARL FGVPLSSYVQ
EPVAQFQAFM PVNINNDYIA PNFEKWQILA LSVPLMIVAA LATHFNARAS IARQPVASLD
NPQTAIMNRL MLWVFPIGVL VGGFFLPVAI LIYWVTQNIW TYCQQHIVFG KLDKEDEEKK
RLAQEKRAEN APKPGAKPKK GAAQAAKLAE AATDADGDDA DAEQAPSKPS TGAKPAAGAK
PAAGAKPKQQ HPSGNARQRQ RNQQQRKKRR
|
|---|
| |