Gene Tpau_4239 details

Gene Information

• Locus tag: Tpau_4239
• ID: 9158427
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 4376745
• End bp: 4377284
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 67%
• Product: single-stranded nucleic acid binding R3H domain protein
• Protein accession: YP_003649146
• Protein GI: 296141903

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGACG ACGTGACTGT CGAGGACGAG AAGACCACAG CGGCACCGGC ATCCGCCGAC 
ACCGCCGTCG ACGAGGACGA CGAGTTGGTC GAAGAGGGCG AGATCGCTGC TGATTACCTC 
GAGCAGCTGC TCGACATCCT GGACTTCGAC GGTGATATCG ACCTTGATGT CGAGGGTGGC 
CGCGCCATCG TCGCGATCGA CGGCGGCGAC GATCTGACGA AGCTCGTCGG TCAGCGCGGT 
GAGGTGCTCG ACGCGCTCCA GGAGCTGACT CGCCTCGCGG TGCAGCAATC CACGGGTGAC 
CGTAGTCGAC TCATGCTCGA CGTCGCCGGC TGGCGGGCCG GTCGGCGTGC GCGTCTGTCC 
GCGCTGGGCG CCGAGGTGGC GGCCCGCGTG GTGGCCAGCG GTGAGAAGGA GTCGCTCAAG 
CCGATGACGC CGTTCGAGCG GAAGATCGTG CACGACGCCG TGGCCAAGGT CGACGGTGTG 
CGTTCCGAGA GCGAGGGCGC GGAGCCGAAC CGTCGCGTCG TGGTTCTGCC CAGCACCTAG 

 

Protein sequence

MSDDVTVEDE KTTAAPASAD TAVDEDDELV EEGEIAADYL EQLLDILDFD GDIDLDVEGG 
RAIVAIDGGD DLTKLVGQRG EVLDALQELT RLAVQQSTGD RSRLMLDVAG WRAGRRARLS 
ALGAEVAARV VASGEKESLK PMTPFERKIV HDAVAKVDGV RSESEGAEPN RRVVVLPST